Module 528 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.000000000000019 | 0.000000044 | 77 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000000019 | |
| Motif 2 |
 |
| e-value: 0.000000044 |
| MSMEG_3520 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) | MSMEG_5722 Uncharacterized protein |
| MSMEG_1937 Molybdopterin biosynthesis protein MoeB | MSMEG_0181 Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17) |
| MSMEG_3242 Putative starvation-induced DNA protecting protein/Ferritin and Dps (Starvation-inducible DNA-binding protein or fine tangled pili major subunit) | MSMEG_1543 Eptc-inducible aldehyde dehydrogenase (EC 1.2.1.3) |
| MSMEG_5180 Uncharacterized protein | MSMEG_6557 Dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_2160 Uncharacterized protein | MSMEG_0342 Uncharacterized protein |
| MSMEG_6253 Ferric uptake regulator, Fur family (EC 1.11.1.6) (Fur family protein transcriptional regulator) | MSMEG_5964 Glycosyl transferase, group 1, putative |
| MSMEG_4482 DNA primase (EC 2.7.7.-) | MSMEG_6243 Response regulator receiver domain protein (Uncharacterized protein) |
| MSMEG_0155 Transcriptional regulator | MSMEG_5685 DNA-binding protein (Uncharacterized protein) |
| MSMEG_0901 Uncharacterized protein | MSMEG_3975 Putative regulatory protein (Regulatory protein, putative) |
| MSMEG_5011 Uncharacterized protein | MSMEG_1111 Uncharacterized protein |
| MSMEG_3621 Membrane NADH dehydrogenase NdhA (EC 1.6.99.3) (NADH dehydrogenase) | MSMEG_1791 UsfY protein |
| MSMEG_3328 Uncharacterized protein | MSMEG_1793 Membrane protein |
| MSMEG_6383 Ferric uptake regulator, Fur family (EC 1.11.1.6) (Transcription regulator FurA) | MSMEG_0025 Conserved membrane protein (Uncharacterized protein) |
| MSMEG_6244 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) | MSMEG_0180 Putative HTH-type transcriptional regulator (Putative transcriptional regulatory protein) |
| MSMEG_3478 Tena/thi-4 family protein |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
M..smegmatis.Acid.NO.treated
Wild.type.rep2.x
Bedaquiline.vs..DMSO.30min
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.2.of.7..falcarinol.treatment
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO..45min
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.4.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.2.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate2
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Comments
Log in to post comments