Module 530 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 0.00000000000006 | 0.000000039 | 75 | 37 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000000000006 | |
| Motif 2 |
 |
| e-value: 0.000000039 |
| MSMEG_3135 Uncharacterized protein | MSMEG_6534 Uncharacterized protein |
| MSMEG_1932 MmpS3 protein | MSMEG_2602 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) (Protocatechuate 3,4-dioxygenase, alpha subunit) |
| MSMEG_4293 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) (Glutamine-synthetase adenylyltransferase) (ATase) ([Glutamate--ammonia-ligase] adenylyltransferase) | MSMEG_0812 Amino acid permease-associated region (Amino acid transporter) |
| MSMEG_3244 Uncharacterized protein | MSMEG_3384 Isoflavone reductase (NmrA-like family protein) |
| MSMEG_5616 Glyoxalase/bleomycin resistance protein/dioxygenase | MSMEG_5251 Uncharacterized protein |
| MSMEG_0925 Uncharacterized protein | MSMEG_0379 Nitrile hydratase activator P14k (Putative nitrile hydratase) (EC 4.2.1.84) |
| MSMEG_3226 Glutamate synthase, NADH/nadph, small subunit (NADH-dependent glutamate synthase small subunit) (EC 1.4.1.-) | MSMEG_4844 Acyl-CoA dehydrogenase |
| MSMEG_0377 Nitrile hydratase (Nitrile hydratase subunit beta) (EC 4.2.1.84) | MSMEG_0444 Agmatine deiminase (EC 3.5.3.12) (Putative agmatine deiminase) (EC 3.5.3.12) |
| MSMEG_0378 Nitrile hydratase alpha subunit (Nitrile hydratase, alpha subunit) (EC 4.2.1.84) | MSMEG_4845 Putative acyl-CoA dehydrogenase |
| MSMEG_0726 Uncharacterized protein | MSMEG_0753 Uncharacterized protein |
| MSMEG_2088 Hypothetical proline-rich protein | MSMEG_1019 Ribonucleoside-diphosphate reductase subunit alpha 1 (EC 1.17.4.1) (Ribonucleotide reductase R1 subunit 1) |
| MSMEG_2791 Pyridoxamine 5'-phosphate oxidase family protein | MSMEG_0754 Uncharacterized protein |
| MSMEG_3002 Carboxylic ester hydrolase (EC 3.1.1.-) | MSMEG_6826 L-lactate permease |
| MSMEG_0115 Haloacid dehalogenase, type II (L-2-haloacid dehalogenase) (EC 3.8.1.2) | MSMEG_2603 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) |
| MSMEG_4264 Uncharacterized protein | MSMEG_2600 Regulatory protein |
| MSMEG_4265 MmpS3 protein (Putative membrane protein mmpS3) | MSMEG_2601 Protocatechuate 3,4-dioxygenase bata subunit (Protocatechuate 3,4-dioxygenase, beta subunit) (EC 1.13.11.3) |
| MSMEG_2299 Ribonucleoside-diphosphate reductase subunit alpha 2 (EC 1.17.4.1) (Ribonucleotide reductase R1 subunit 2) | MSMEG_4090 Putative IclR family protein transcriptional regulator (Transcriptional regulator IclR) |
| MSMEG_0796 ABC transporter integral membrane subunit (Putative ABC transporter membrane protein) | MSMEG_2604 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (EC 4.1.1.44) (4-carboxymuconolactone decarboxylase) (EC 4.1.1.44) |
| MSMEG_4103 Alkanesulfonate monooxygenase (EC 1.14.14.5) |
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
DamtR.with.vs..DamtR.without.N_.rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
X4dbfcy5plogcy3slide480norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Bedaquiline.vs..DMSO.120min
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