Module 535 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 3e-20 | 0.00000000003 | 83 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3e-20 | |
| Motif 2 |
 |
| e-value: 0.00000000003 |
| MSMEG_1308 Peptidase S15 | MSMEG_1545 Uncharacterized protein |
| MSMEG_6853 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) | MSMEG_1546 Coenzyme B12-dependent glycerol dehydrogenase small subunit |
| MSMEG_6857 Putative transcription regulator (Transcriptional regulator, IclR family) | MSMEG_1547 Glycerol dehydratase large subunit (EC 4.2.1.30) (Uncharacterized protein) |
| MSMEG_6856 MmgE/PrpD family protein (EC 4.1.1.6) | MSMEG_0758 Uncharacterized protein |
| MSMEG_6855 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Putative carboxyvinyl-carboxyphosphonate phosphorylmutase 1 (Carboxyphosphonoenolpyruvate phosphonomutase)) | MSMEG_0759 Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase) |
| MSMEG_6854 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) | MSMEG_2035 Amine oxidase [flavin-containing] B (EC 1.4.3.4) (Putative flavin-containing monoamine oxidase aofH) |
| MSMEG_1548 Glycerol dehydratase (EC 4.2.1.30) (Propanediol utilization: dehydratase, medium subunit) | MSMEG_5022 Flavin-containing monooxygenase FMO (Flavoprotein involved in K+ transport-like protein) (EC 1.14.13.8) |
| MSMEG_4536 Uncharacterized protein | MSMEG_5021 Alcohol dehydrogenase GroES domain protein (Alcohol dehydrogenase, zinc-containing) |
| MSMEG_0525 Uncharacterized protein | MSMEG_5020 Acetoin reductase (Acetoin(Diacetyl) reductase) (EC 1.1.1.303) |
| MSMEG_0524 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_2467 Branched-chain alpha-keto acid dehydrogenase E1 component (EC 1.2.4.4) (Transketolase, central region) |
| MSMEG_0526 Glucose-methanol-choline oxidoreductase (EC 1.1.99.1) (Oxidoreductase, GMC family protein) | MSMEG_2465 Adenine deaminase (Amidohydrolase) |
KO_stationary.phase_rep2
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.5.of.7..panaxydol.treatment
Wild.type.rep2.x
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
KO_log.phase_rep2
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide480norm
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Plogcy5plogcy3slide113norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
X3dbfcy5plogcy3slide603norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.vs..DamtR.N.surplus_dyeswap_rep2
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
X4dbfcy5plogcy3slide901norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.1.of.6..kanamycin.treatment
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