Module 539 Residual: 0.42
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.42 | 0.00000000000075 | 0.0028 | 80 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000000000075 | |
| Motif 2 |
 |
| e-value: 0.0028 |
| MSMEG_0063 PE family protein (PE-like protein) | MSMEG_4653 Hydroxypyruvate isomerase (EC 5.3.1.22) |
| MSMEG_1378 1-phosphofructokinase (Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) (1-phosphofructokinase protein)) (EC 2.7.1.56) | MSMEG_5143 HTH-type transcriptional regulator DegA (LacI-family transcriptional regulator) (EC 5.1.1.1) |
| MSMEG_1377 DeoR-family protein transcriptional regulator (DeoR-family transcriptional regulator) | MSMEG_5144 Glycoside hydrolase, family 3-like protein (EC 3.2.1.21) (Xylosidase/arabinosidase) |
| MSMEG_1376 Putative xylulose kinase | MSMEG_5145 Extracellular solute-binding protein, family protein 1 |
| MSMEG_1375 Fructose-bisphosphate aldolase (EC 4.1.2.13) (Tagatose-1,6-bisphosphate aldolase GatY) (EC 4.1.2.-) | MSMEG_5146 Binding protein dependent transport protein (Putative binding-protein-dependent transport protein) |
| MSMEG_4650 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) (Putative oxidoreductase YisS) (EC 1.-.-.-) | MSMEG_4652 D-oliose 4-ketoreductase (Oxidoreductase) |
| MSMEG_0064 PPE family protein (Ppe family protein) | MSMEG_4651 AP endonuclease, family protein 2 (Xylose isomerase-like TIM barrel) |
| MSMEG_0065 Uncharacterized protein | MSMEG_4648 DNA-binding protein (Regulatory protein LacI) |
| MSMEG_0066 ESAT-6-like protein | MSMEG_4649 Phytanoyl-CoA dioxygenase |
| MSMEG_5147 Binding-protein-dependent transport systems inner membrane component (Sugar ABC-transporter integral membrane protein) |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
Wild.type.rep2.y
Biological.replicate.3.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.15min
Plogcy5plogcy3slide110norm
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
Biological.replicate.2.of.7..falcarinol.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
dosR.WT_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
X3dbfcy3plogcy5slide607norm
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep1
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.1.of.7..falcarinol.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.1.of.7..ethambutol.treatment
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.5.of.7..falcarinol.treatment
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