Module 541 Residual: 0.59
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.59 | 0.0000000000008 | 0.0000000000017 | 75 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000008 | |
| Motif 2 |
 |
| e-value: 0.0000000000017 |
| MSMEG_4779 Probable regulatory protein (Transcriptional regulator, TetR family) | MSMEG_0932 ROK family protein |
| MSMEG_5627 Rieske (2Fe-2S) region (EC 1.14.12.12) (Rieske [2Fe-2S] domain protein) | MSMEG_0933 D-inositol 3-phosphate glycosyltransferase (EC 2.4.1.250) (N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase) (GlcNAc-Ins-P N-acetylglucosaminyltransferase) |
| MSMEG_6291 D-amino acid dehydrogenase (EC 1.4.99.1) (D-amino-acid dehydrogenase) | MSMEG_5625 Cyclododecanone monooxygenase (Cyclohexanone monooxygenase) (EC 1.14.13.22) |
| MSMEG_0923 Uncharacterized protein | MSMEG_0934 Uncharacterized protein |
| MSMEG_2128 Lysine N-acyltransferase mbtK (Malonyl CoA decarboxylase) | MSMEG_5626 Luciferase (Luciferase-like monooxygenase) (EC 1.14.14.3) |
| MSMEG_3467 Uncharacterized protein | MSMEG_5628 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_2370 DoxX (DoxX subfamily protein, putative) | MSMEG_6289 Trypsin |
| MSMEG_2790 Uncharacterized protein | MSMEG_4923 Endonuclease NucS (EC 3.1.-.-) |
| MSMEG_6815 Secreted protein (Twin-arginine translocation pathway signal) | MSMEG_4922 Uncharacterized protein |
| MSMEG_1169 Integral membrane transport protein (Major facilitator superfamily MFS_1) | MSMEG_0208 Ribonuclease |
| MSMEG_5500 Uncharacterized protein | MSMEG_1750 Uncharacterized protein |
| MSMEG_4780 Cytochrome P450 (Cytochrome p450) | MSMEG_6363 Cysteine desulfurase family protein (Putative aminotransferase/cysteine desulfurase) (EC 2.8.1.7) |
| MSMEG_6129 Uncharacterized protein | MSMEG_2369 LppZ protein |
| MSMEG_3298 Response regulator receiver domain protein | MSMEG_0206 Acyltransferase (Acyltransferase 3) |
| MSMEG_6127 Anti-sigma factor antagonist | MSMEG_2852 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) |
| MSMEG_5740 Uncharacterized protein |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.6..negative.control
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
X2XR.rep2
Wild.type.rep2.y
dosR.WT_Replicate4
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Sub.MIC.INH
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
WT.with.vs..without.N_rep1
X2XR.rep1
Biological.replicate.7.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.6.of.7..panaxydol.treatment
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