Module 553 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 0.00000027 | 0.000041 | 88 | 15 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000027 | |
| Motif 2 |
 |
| e-value: 0.000041 |
| MSMEG_6800 Phosphoribulokinase/uridine kinase | MSMEG_6798 LacI-family transcriptional regulator (EC 5.1.1.1) (Ribose operon repressor) |
| MSMEG_1498 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) | MSMEG_6801 Kinase, PfkB family (Kinase, pfkB family protein) |
| MSMEG_1499 FAD-binding monooxygenase (Oxygenase) | MSMEG_6802 ABC transporter ATP-binding protein (ABC transporter related protein) |
| MSMEG_1496 3-hydroxyisobutyrate dehydrogenase (HIBADH) (EC 1.1.1.31) | MSMEG_6803 Monosaccharide-transporting ATPase (EC 3.6.3.17) (Ribose transport system permease protein RbsC) |
| MSMEG_6325 Mycobacterium tuberculosis paralogous family 11 (Uncharacterized protein) | MSMEG_6804 Periplasmic binding protein/LacI transcriptional regulator (EC 3.6.3.17) (Sugar ABC transporter substrate-binding protein) |
| MSMEG_6323 Uncharacterized protein | MSMEG_6805 Beta-lactamase |
| MSMEG_1500 TetR family protein transcriptional regulatory protein | MSMEG_1497 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Acyl-CoA dehydrogenase family protein member 8) |
| MSMEG_6324 Animal heme peroxidase (Peroxidase) |
KO_stationary.phase_rep1
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep2.y
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.1.of.7..falcarinol.treatment
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide487norm
stphcy5plogcy3slide580norm
X3dbfcy3plogcy5slide607norm
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.7..ethambutol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.without.N_rep2
dosR.WT_Replicate3
dosR.WT_Replicate2
DglnR_without.vs..with.N_rep1
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep2
Sub.MIC.INH
Bedaquiline.vs..DMSO.15min
MB100pruR.vs..MB100..rep.3
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.1.of.6..isoniazid.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate4
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
Slow.vs..Fast.Replicate.5
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
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