Module 568 Residual: 0.61
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.61 | 0.0000000085 | 0.63 | 77 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000085 | |
| Motif 2 |
 |
| e-value: 0.63 |
| MSMEG_1442 30S ribosomal protein S3 | MSMEG_0695 Isoniazid inductible protein IniA |
| MSMEG_0903 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) | MSMEG_1735 Dihydrolipoamide dehydrogenase (Pyridine nucleotide-disulfide oxidoreductase dimerization region) (EC 1.8.1.4) |
| MSMEG_3521 Molybdopterin oxidoreductase (EC 1.2.1.2) | MSMEG_5452 Uncharacterized protein |
| MSMEG_5671 YbaK/prolyl-tRNA synthetase associated region | MSMEG_0426 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) |
| MSMEG_1438 50S ribosomal protein L23 | MSMEG_0904 Probable conserved membrane protein (Uncharacterized protein) |
| MSMEG_6465 Chloride channel (Voltage-gated chloride channel) | MSMEG_3859 Polyprenol monophosphomannose synthase (PPM synthase) (Polyprenol-P-Man synthase) (Ppm1) (EC 2.4.1.-) (Dolichol-phosphate mannose synthase) (EC 2.4.1.83) |
| MSMEG_1433 Thioesterase | MSMEG_0998 Oxidoreductase, molybdopterin binding |
| MSMEG_1437 50S ribosomal protein L4 | MSMEG_1441 50S ribosomal protein L22 |
| MSMEG_1763 Leucine-responsive regulatory protein | MSMEG_1440 30S ribosomal protein S19 |
| MSMEG_3861 Amidohydrolase 3 | MSMEG_6200 Uncharacterized protein |
| MSMEG_3860 Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.-) (LntMs) | MSMEG_6201 Transglycosylase |
| MSMEG_1444 50S ribosomal protein L29 | MSMEG_1445 30S ribosomal protein S17 |
| MSMEG_3278 Uncharacterized protein | MSMEG_1501 S-adenosyl-L-methionine-dependent methyltransferase (EC 2.1.1.-) |
| MSMEG_3730 GAF modulated sigma54 specific transcriptional regulator, Fis family (EC 2.7.13.3) (Helix-turn-helix, Fis-type, putative) | MSMEG_4219 Cell division protein SepF |
| MSMEG_4220 Uncharacterized protein | MSMEG_0902 Cyclopropane-fatty-acyl-phospholipid synthase 1 (Mycolic acid synthase) (EC 2.1.1.79) |
| MSMEG_4221 Laccase domain protein | MSMEG_6388 Probable arabinosyltransferase B (EC 2.4.2.-) |
Wild.type.rep2.x
KO_stationary.phase_rep2
Biological.replicate.2.of.7..panaxydol.treatment
X4XR.rep1
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.3.of.7..falcarinol.treatment
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..negative.control
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.5.of.6..kanamycin.treatment
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