Module 569 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 0.00022 | 0.033 | 74 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00022 | |
| Motif 2 |
 |
| e-value: 0.033 |
| MSMEG_4624 50S ribosomal protein L27 | MSMEG_3751 Cytotoxin/hemolysin, TlyA (Hemolysin A) |
| MSMEG_4625 50S ribosomal protein L21 | MSMEG_3750 NAD kinase (EC 2.7.1.23) (ATP-dependent NAD kinase) |
| MSMEG_4620 NAD-dependent protein deacetylase (EC 3.5.1.-) (Regulatory protein SIR2 homolog) | MSMEG_4898 Lipoprotein lprD (Uncharacterized protein) |
| MSMEG_1954 ABC1 family protein | MSMEG_4103 Alkanesulfonate monooxygenase (EC 1.14.14.5) |
| MSMEG_0645 Putative beta-1,3-glucanase | MSMEG_4102 Putative acyl-CoA dehydrogenase (Uncharacterized protein) |
| MSMEG_1069 Amino acid permease-associated region | MSMEG_1070 3-oxoacyl-[acyl-carrier-protein] reductase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_1068 Regulatory protein (Uncharacterized protein) | MSMEG_0760 Thioesterase family protein (Thioesterase superfamily) |
| MSMEG_4850 Short-chain dehydrogenase/reductase SDR | MSMEG_1074 Polysaccharide deacetylase |
| MSMEG_2252 Flavin-type hydroxylase | MSMEG_4900 Conserved membrane protein (Pks14 protein) |
| MSMEG_5695 Glutathione S-transferase | MSMEG_1636 RNA methyltransferase, TrmH family protein, group 2 |
| MSMEG_2359 Methionine synthase, vitamin-B12 independent (EC 2.1.1.14) | MSMEG_4043 Amidohydrolase 2 (Uncharacterized protein) |
| MSMEG_3754 TPR-repeat-containing protein (Tetratricopeptide TPR_4) | MSMEG_3897 Pup deamidase/depupylase (EC 3.4.-.-) (EC 3.5.1.-) (Deamidase of protein Pup) |
| MSMEG_3753 HAD-superfamily hydrolase, subfamily IIA (Hydrolase) | MSMEG_1403 Cutinase superfamily protein |
| MSMEG_3752 Uncharacterized protein | MSMEG_1118 Amino acid permease (Amino acid permease-associated region) |
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
Biological.replicate.3.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.3
Biological.replicate.4.of.7..ethambutol.treatment
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Sub.MIC.INH
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
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