Module 571 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 3.6e-19 | 0.00021 | 79 | 20 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.6e-19 | |
| Motif 2 |
 |
| e-value: 0.00021 |
| MSMEG_3047 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) | MSMEG_0597 Uncharacterized protein |
| MSMEG_0599 Acyl-CoA synthase | MSMEG_3344 Uncharacterized protein |
| MSMEG_3045 Integral membrane protein (Putative export or membrane protein) | MSMEG_4911 Nicotinate phosphoribosyltransferase (EC 6.3.4.21) |
| MSMEG_3044 Dihydroorotase (DHOase) (EC 3.5.2.3) | MSMEG_4912 Putative ATP-dependent DNA helicase (Putative helicase) |
| MSMEG_3043 Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase) | MSMEG_4661 Sugar kinase, ribokinase family protein |
| MSMEG_3042 Bifunctional protein PyrR | MSMEG_4909 Putative transcriptional regulatory protein (Uncharacterized protein) |
| MSMEG_3046 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain) | MSMEG_3048 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) |
| MSMEG_6341 6-phosphogluconate dehydrogenase NAD-binding protein (6-phosphogluconate dehydrogenase, NAD-binding) | MSMEG_6342 Oxidoreductase |
| MSMEG_4910 ATP-dependent Clp protease adapter protein ClpS | MSMEG_2288 |
| MSMEG_4659 GntR-family protein transcriptional regulator (GntR-family transcriptional regulator) | MSMEG_4908 Endo-type 6-aminohexanoate oligomer hydrolase (Peptidase S58 DmpA) |
KO_stationary.phase_rep1
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.4.of.6..negative.control
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Wild.type.rep3
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..negative.control
MB100pruR.vs..MB100.rep.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
Biological.replicate.2.of.6..isoniazid.treatment
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
Biological.replicate.3.of.6..kanamycin.treatment
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Wild.type.rep1.y
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Bedaquiline.vs..DMSO.120min
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