Module 573 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 1.8e-16 | 0.0000035 | 81 | 18 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.8e-16 | |
| Motif 2 |
 |
| e-value: 0.0000035 |
| MSMEG_0675 Cytochrome P450 144 cyp144 (Putative cytochrome P450 144) (EC 1.14.-.-) | MSMEG_1071 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) |
| MSMEG_6605 PadR-like family transcriptional regulator (Transcriptional regulatory protein) | MSMEG_1072 Agmatinase (EC 3.5.3.11) |
| MSMEG_4979 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) (ATP-sulfurylase small subunit) (Sulfate adenylate transferase) | MSMEG_0676 Putative transcriptional regulatory protein |
| MSMEG_4977 3'(2'),5'-bisphosphate nucleotidase, putative (Monophosphatase CysQ) | MSMEG_1074 Polysaccharide deacetylase |
| MSMEG_4772 AMP-dependent synthetase and ligase (Acyl-CoA synthase) | MSMEG_5365 RNA polymerase sigma-70 factor |
| MSMEG_4773 Amidohydrolase 2 (Amidohydrolase family protein) | MSMEG_5366 Uncharacterized protein |
| MSMEG_4774 AMP-dependent synthetase and ligase | MSMEG_4978 Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 (EC 2.7.-.-) (Sulfate adenylytransferase, large subunit/adenylylsulfate kinase) (EC 2.7.1.26) (EC 2.7.7.4) |
| MSMEG_6603 NADH:flavin oxidoreductase/nadh oxidase | MSMEG_1069 Amino acid permease-associated region |
| MSMEG_1070 3-oxoacyl-[acyl-carrier-protein] reductase (Short-chain dehydrogenase/reductase SDR) | MSMEG_1068 Regulatory protein (Uncharacterized protein) |
KO_stationary.phase_rep1
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep3
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
Biological.replicate.2.of.6..kanamycin.treatment
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
rel.knockout.rep1
Biological.replicate.1.of.6..negative.control
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.1.of.6..kanamycin.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
mc2155.vs.Dcrp1.replicate.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep1
Bedaquiline.vs..DMSO.120min
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