Module 578 Residual: 0.58
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.58 | 3.2e-24 | 0.00000000012 | 87 | 25 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.2e-24 | |
| Motif 2 |
 |
| e-value: 0.00000000012 |
| MSMEG_5040 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_5749 Uncharacterized protein |
| MSMEG_4588 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit | MSMEG_5768 Uncharacterized protein |
| MSMEG_6719 Alpha/beta hydrolase fold protein (EC 3.3.2.9) (Epoxide hydrolase) | MSMEG_5740 Uncharacterized protein |
| MSMEG_5750 Uncharacterized protein | MSMEG_2480 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein, putative) |
| MSMEG_1184 Serine esterase, cutinase family protein | MSMEG_2481 Uncharacterized protein |
| MSMEG_3396 Transcriptional regulator, IclR family protein | MSMEG_5279 Rhodanese-like protein (Uncharacterized protein) |
| MSMEG_4587 Aliphatic sulfonates import ATP-binding protein SsuB (EC 3.6.3.-) | MSMEG_1543 Eptc-inducible aldehyde dehydrogenase (EC 1.2.1.3) |
| MSMEG_4586 ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein (ABC-type transporter substrate-binding protein) | MSMEG_2038 Flavin-binding monooxygenase (Monooxygenase, flavin-binding family protein) |
| MSMEG_4589 Rhodanese domain protein/cystathionine beta-lyase (Rhodanese-like protein) (EC 2.8.1.1) | MSMEG_4670 Glycosyltransferase, MGT family (EC 2.4.1.17) (N-glycosylation) |
| MSMEG_5767 Uncharacterized protein | MSMEG_3482 Uncharacterized protein |
| MSMEG_0198 Acyl-CoA dehydrogenase type 2 domain protein (Acyl-CoA dehydrogenase, C-domain protein) | MSMEG_5281 LpqV (LpqV protein) |
| MSMEG_2478 Fumarylacetoacetate hydrolase family protein | MSMEG_5280 Cysteine dioxygenase type I (Cysteine dioxygenase type I superfamily protein) |
| MSMEG_5038 Cytochrome P450 CYP130 (Putative cytochrome P450 123) (EC 1.14.-.-) |
KO_stationary.phase_rep2
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Wild.type.rep2.y
Wild.type.rep2.x
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
X3dbfcy3plogcy5slide607norm
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.120min
Plogcy5plogcy3slide110norm
dosR.WT_Replicate3
dosR.WT_Replicate2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.5.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep2
Sub.MIC.INH
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Bedaquiline.vs..DMSO.30min
WT.with.vs..without.N_rep1
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Wild.type.rep3
Biological.replicate.4.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.3
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..kanamycin.treatment
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