Module 588 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.50 0.000000026 0.00000000001 80 29 20160204
Motif 1
e-value: 0.000000026
e-value: 0.00000000001
MSMEG_6919 Proline rich secreted protein Mtc28 (Proline-rich 28 kDa antigen) MSMEG_6917 Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
MSMEG_4507 Uncharacterized protein MSMEG_5702 Molybdenum cofactor synthesis domain protein
MSMEG_4506 Uncharacterized protein MSMEG_5703 Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)
MSMEG_4505 Heat-inducible transcription repressor HrcA MSMEG_3791 50S ribosomal protein L20
MSMEG_3015 Uncharacterized protein MSMEG_5701 Molybdopterin converting factor, subunit 2 (Putative molybdenum cofactor biosynthesis protein)
MSMEG_3016 Transglutaminase family protein (Uncharacterized protein) MSMEG_5704 Uncharacterized protein
MSMEG_3017 Uncharacterized protein MSMEG_5705 Uncharacterized protein
MSMEG_5636 Metal cation transporter ATPase P-type ctpE (P-type ATPase-metal cation transport) MSMEG_6786 Uncharacterized protein
MSMEG_5637 Penicillin-binding protein 4 MSMEG_6784 Beta-lactamase
MSMEG_3018 Transglutaminase domain protein (Transglutaminase-like protein) MSMEG_4190 Inositol monophosphatase family protein (Putative inositol monophosphatase CysQ)
MSMEG_3019 Uncharacterized protein MSMEG_2469 AMP-dependent synthetase and ligase
MSMEG_2765 Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23) (dUTP pyrophosphatase) MSMEG_5022 Flavin-containing monooxygenase FMO (Flavoprotein involved in K+ transport-like protein) (EC 1.14.13.8)
MSMEG_4187 Uncharacterized protein MSMEG_5021 Alcohol dehydrogenase GroES domain protein (Alcohol dehydrogenase, zinc-containing)
MSMEG_2766 Uncharacterized protein MSMEG_5020 Acetoin reductase (Acetoin(Diacetyl) reductase) (EC 1.1.1.303)
MSMEG_4188 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.243)
KO_stationary.phase_rep2
KO_log.phase_rep1
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
rel.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.6..kanamycin.treatment
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.4
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.6.of.7..panaxydol.treatment
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