Module 592 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.50 | 0.00000000000021 | 0.0000000053 | 78 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000000000021 | |
| Motif 2 |
 |
| e-value: 0.0000000053 |
| MSMEG_3894 Proteasome subunit alpha (EC 3.4.25.1) (20S proteasome alpha subunit) (Proteasome core protein PrcA) | MSMEG_0207 MarR-family protein transcriptional regulator (MarR-family transcriptional regulator) |
| MSMEG_3895 Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PrcB) | MSMEG_6736 LacI-family protein transcriptional regulator (LacI-family transcriptional regulator) |
| MSMEG_5402 Dehydrogenase DhgA (Short-chain dehydrogenase/reductase SDR) | MSMEG_3025 Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS) |
| MSMEG_0943 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) | MSMEG_3027 Secreted solute-binding protein,aminodeoxychorismate lyase-like protein (Uncharacterized protein) |
| MSMEG_0941 AP endonuclease, family protein 2 (Xylose isomerase-like TIM barrel) | MSMEG_3411 MOSC domain protein |
| MSMEG_3409 Alcohol dehydrogenase zinc-binding domain protein (EC 1.-.-.-) (Oxidoreductase) | MSMEG_3028 Shikimate 5-dehydrogenase AroE (Shikimate-5-dehydrogenase) (EC 1.1.1.25) |
| MSMEG_0940 Uncharacterized protein | MSMEG_6490 Major facilitator superfamily protein |
| MSMEG_3410 Transcriptional regulator, TetR family protein | MSMEG_6489 2,6-dihydroxypyridine hydroxylase (Monooxygenase FAD-binding protein) (EC 1.14.13.1) |
| MSMEG_6737 Putative membrane protein | MSMEG_5404 AMP-dependent synthetase and ligase (EC 6.2.1.17) (Propionate--CoA ligase) |
| MSMEG_3026 Putative pre-16S rRNA nuclease (EC 3.1.-.-) | MSMEG_0942 Uncharacterized protein |
| MSMEG_0205 Antibiotic biosynthesis monooxygenase (Tetracenomycin polyketide synthesis hydroxylase TcmH) (EC 1.-.-.-) |
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.5.of.7..panaxydol.treatment
M..smegmatis.Acid.NO.treated
Wild.type.rep2.x
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.5.of.6..negative.control
X2XR.rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
DamtR.with.vs..DamtR.without.N_.rep1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep1
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.7..panaxydol.treatment
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
dosR.WT_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
X4dbfcy3plogcy5slide903norm
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
Bedaquiline.vs..DMSO.15min
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Comments
Log in to post comments