Module 597 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 0 | 1.10002e-41 | 82 | 27 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0 | |
| Motif 2 |
 |
| e-value: 1.10002e-41 |
| MSMEG_2977 Uncharacterized protein | MSMEG_3773 Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11) |
| MSMEG_5125 YceI family protein (YceI like family protein) | MSMEG_3772 Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3) |
| MSMEG_2129 Uncharacterized protein | MSMEG_4341 Uncharacterized protein |
| MSMEG_4872 Short chain dehydrogenase | MSMEG_4344 Putative monooxygenase |
| MSMEG_2277 DNA ligase B (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) | MSMEG_5210 Alpha/beta hydrolase fold protein (Hydrolase) |
| MSMEG_3561 Glutamine synthetase, catalytic domain (EC 6.3.1.2) | MSMEG_5213 Uncharacterized protein |
| MSMEG_3562 4-carboxymuconolactone decarboxylase domain protein (EC 4.1.1.44) (Carboxymuconolactone decarboxylase) (EC 4.1.1.44) | MSMEG_0284 NAD(P)H dehydrogenase (Quinone) (EC 1.6.-.-) (Ribosyldihydronicotinamide dehydrogenase (Quinone)) (EC 1.10.99.2) |
| MSMEG_2517 Alpha/beta hydrolase fold protein (EC 3.-.-.-) (Hydrolase, alpha/beta fold family protein, putative) | MSMEG_0285 Transcriptional regulator TetR family protein |
| MSMEG_2515 Tyrosine recombinase XerC | MSMEG_4691 HNH nuclease |
| MSMEG_3845 UPF0235 protein MSMEG_3845 | MSMEG_6573 Uncharacterized protein |
| MSMEG_3775 Arginine biosynthesis bifunctional protein ArgJ | MSMEG_1676 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase) |
| MSMEG_3774 Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK) | MSMEG_2032 Uncharacterized protein |
| MSMEG_3776 N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) | MSMEG_3252 UPF0060 membrane protein MSMEG_3252/MSMEI_3169 |
| MSMEG_3771 Arginine repressor |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.4.of.6..negative.control
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Bedaquiline.vs..DMSO.30min
Biological.replicate.2.of.7..falcarinol.treatment
Wild.type.rep3
Wild.type.rep1.x
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
KO_log.phase_rep1
dosR.WT_Replicate4
X3dbfcy5plogcy3slide601norm
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
WT.vs..DamtR.N.surplus_rep1
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
X4dbfcy3plogcy5slide903norm
WT.with.vs..without.N_rep1
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Wild.type.rep1.y
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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