Module 606 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 1.4e-28 | 0.0000000038 | 85 | 16 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.4e-28 | |
| Motif 2 |
 |
| e-value: 0.0000000038 |
| MSMEG_6637 Uncharacterized protein | MSMEG_3332 TetR-family transcriptional regulator (Transcriptional regulator, TetR family protein) |
| MSMEG_6636 Superoxide dismutase (EC 1.15.1.1) | MSMEG_3388 S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase (EC 1.1.1.1) (EC 1.1.1.284) |
| MSMEG_0316 Putative NagC regulator | MSMEG_3389 Putative acetolactate synthase |
| MSMEG_0314 Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49) | MSMEG_5403 Probable cobalt/nickel-exporting P-type ATPase (EC 3.6.3.-) (Cation-transporting P-type ATPase CtpD) |
| MSMEG_0313 6-phosphogluconate dehydratase (EC 4.2.1.12) (Phosphogluconate dehydratase) | MSMEG_3390 Enoyl-CoA hydratase (EC 4.2.1.17) |
| MSMEG_0312 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (EC 4.1.2.14) (EC 4.1.3.16) | MSMEG_5405 Transcriptional regulator, ArsR family protein (Transcriptional regulatory protein) |
| MSMEG_3331 Uncharacterized protein | MSMEG_3386 Shikimate transporter |
| MSMEG_3330 Conserved domain protein (Uncharacterized protein) | MSMEG_3387 Aldehyde dehydrogenase (NAD) family protein (EC 1.2.1.-) (NAD-dependent aldehyde dehydrogenase, AldA_1) |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
DamtR.with.vs..DamtR.without.N_.rep1
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
X2XR.rep1
MB100pruR.vs..MB100..rep.3
Biological.replicate.5.of.6..negative.control
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
WT_log.phase_rep2
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
WT_log.phase_rep1
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Wild.type.rep2.x
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.5.of.7..falcarinol.treatment
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