Module 610 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.000003 | 0.00014 | 77 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000003 | |
| Motif 2 |
 |
| e-value: 0.00014 |
| MSMEG_0860 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) | MSMEG_0858 Cell division control protein Cdc48 (Conserved ATPase) (EC 3.6.4.6) |
| MSMEG_0861 Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain] | MSMEG_2197 Uncharacterized protein |
| MSMEG_3155 Band 7 protein (SPFH domain/band 7 family protein) | MSMEG_0328 Uncharacterized protein |
| MSMEG_3154 Conserved membrane protein (Membrane protein implicated in regulation of membrane protease activity) | MSMEG_0363 TetR-family protein regulatory protein |
| MSMEG_3153 Uncharacterized protein | MSMEG_0362 Amidohydrolase 2 |
| MSMEG_0323 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Acyl-CoA dehydrogenase, short-chain specific, putative) | MSMEG_2884 Cyclohexanone monooxygenase |
| MSMEG_0356 Acetyltransferase | MSMEG_2885 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) |
| MSMEG_0357 Transmembrane transport protein | MSMEG_0326 AMP-dependent synthetase and ligase (EC 2.3.1.86) |
| MSMEG_2433 D-alanyl-D-alanine carboxypeptidase (Putative D-alanyl-D-alanine carboxypeptidase Dacb2 (Penicillin-binding protein)) (EC 3.4.16.4) | MSMEG_0325 Uncharacterized protein |
| MSMEG_2432 D-alanyl-D-alanine carboxypeptidase (Putative D-alanyl-D-alanine carboxypeptidase Dacb2) (EC 3.4.16.4) | MSMEG_2883 Feruloyl-CoA synthetase |
| MSMEG_0324 Uncharacterized protein | MSMEG_6302 DNA ligase C1 (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) |
| MSMEG_0275 Bacterial microcompartments protein family protein (Microcompartments protein) | MSMEG_6301 DNA polymerase LigD, polymerase domain |
| MSMEG_0274 Uncharacterized protein | MSMEG_6304 DNA ligase C2 (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) |
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.3.of.6..kanamycin.treatment
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
KO_log.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
WT_log.phase_rep2
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
X4dbfcy5plogcy3slide480norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
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