Module 613 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.000000000000051 | 0.0000000035 | 81 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000000051 | |
| Motif 2 |
 |
| e-value: 0.0000000035 |
| MSMEG_4545 ABC transporter solute-binding protein (Bacterial extracellular solute-binding protein, family protein 5) | MSMEG_2367 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC 6.3.5.-) |
| MSMEG_3078 UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C) | MSMEG_3003 Aspartate--tRNA(Asp/Asn) ligase (EC 6.1.1.23) (Aspartyl-tRNA synthetase) (AspRS) (Non-discriminating aspartyl-tRNA synthetase) (ND-AspRS) |
| MSMEG_3076 Gamma-glutamyltransferase (Gamma-glutamyltransferase 1 Threonine peptidase MEROPS family T03) (EC 2.3.2.2) | MSMEG_3001 Uncharacterized protein |
| MSMEG_3075 Acetyltransferase, GNAT family protein (GCN5-related N-acetyltransferase) (EC 2.3.1.128) | MSMEG_0915 Polyphosphate kinase 2 superfamily protein |
| MSMEG_2181 Cell filamentation protein | MSMEG_4673 Clp protease (EC 3.4.21.92) |
| MSMEG_6428 Uncharacterized protein | MSMEG_4672 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) |
| MSMEG_2313 | MSMEG_1617 Kumamolisin (Peptidase S8 and S53, subtilisin, kexin, sedolisin) (EC 3.4.21.101) |
| MSMEG_2080 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Putative acyl-CoA dehydrogenase) | MSMEG_6787 Ribose 5-phosphate isomerase (EC 5.3.1.6) |
| MSMEG_2081 Putative acyl-CoA dehydrogenase | MSMEG_6785 Triosephosphate isomerase (EC 5.3.1.1) |
| MSMEG_6279 Recombination protein RecR | MSMEG_2683 Thymidylate synthase ThyX (TS) (TSase) (EC 2.1.1.148) |
| MSMEG_3463 Putative esterase | MSMEG_1032 Uncharacterized protein |
| MSMEG_1550 PduH protein (Uncharacterized protein) | MSMEG_2684 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) |
| MSMEG_3966 Uncharacterized protein | MSMEG_2685 Ribonuclease J (RNase J) (EC 3.1.-.-) |
| MSMEG_2968 Uncharacterized protein | MSMEG_4413 Uncharacterized protein |
| MSMEG_2967 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein (Uncharacterized protein) | MSMEG_2897 Uncharacterized protein |
| MSMEG_2966 Major facilitator family protein transporter | MSMEG_5440 Deoxyribonuclease (TatD-related deoxyribonuclease) |
Wild.type.rep2.x
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Wild.type.rep3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.7.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Bedaquiline.vs..DMSO.60min
Biological.replicate.2.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.6.of.7..ethambutol.treatment
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