Module 627 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.00004 | 7.1 | 77 | 35 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00004 | |
| Motif 2 |
 |
| e-value: 7.1 |
| MSMEG_4351 Putative oxidoreductase YjgI (EC 1.-.-.-) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_3809 Uncharacterized protein |
| MSMEG_3173 L-asparaginase (L-asparaginase AnsA) (EC 3.5.1.1) | MSMEG_4222 Cell division protein FtsZ |
| MSMEG_5612 Amino-acid acetyltransferase | MSMEG_0528 Luciferase-like protein (Uncharacterized protein) |
| MSMEG_6615 Uncharacterized protein | MSMEG_4634 Uncharacterized protein |
| MSMEG_2978 ABC transporter ATP-binding protein (Urea ABC transporter, ATPase subunit UrtE) (EC 3.6.3.25) | MSMEG_4384 Penicillin binding protein transpeptidase domain protein |
| MSMEG_2979 ABC transporter ATP-binding protein | MSMEG_3347 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
| MSMEG_6772 Homoserine O-acetyltransferase (EC 2.3.1.-) (EC 2.3.1.31) | MSMEG_2981 Branched-chain amino acid ABC transporter permease protein (Branched-chain amino acid ABC-type transport system, permease component) |
| MSMEG_2896 Uncharacterized protein | MSMEG_4380 ABC transporter domain protein (EC 3.-.-.-) (ABC transporter, permease/ATP-binding protein) |
| MSMEG_4013 Methylenetetrahydromethanopterin reductase (EC 1.5.99.11) (Oxidoreductase) | MSMEG_2982 Extracellular ligand-binding receptor (Putative periplasmic binding protein) |
| MSMEG_5831 Phosphoribosylformylglycinamidine synthase subunit PurQ (FGAM synthase) (EC 6.3.5.3) (Formylglycinamide ribonucleotide amidotransferase subunit I) (Glutaminase PurQ) (Phosphoribosylformylglycinamidine synthase subunit I) | MSMEG_5256 (2Z,6E)-farnesyl diphosphate synthase (EC 2.5.1.68) (Short-chain Z-isoprenyl diphosphate synthase) (Z-FPP synthase) (Z-FPPS) (Z-Polyprenyl diphosphate synthase) (Z-isoprenyl diphosphate synthase) |
| MSMEG_5832 Phosphoribosylformylglycinamidine synthase subunit PurS (FGAM synthase) (EC 6.3.5.3) (Formylglycinamide ribonucleotide amidotransferase subunit III) (Phosphoribosylformylglycinamidine synthase subunit III) | MSMEG_0544 LysR family transcriptional regulator (Transcriptional regulator) |
| MSMEG_6425 Rhodanese-like domain protein | MSMEG_5862 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_4483 Deoxyguanosinetriphosphate triphosphohydrolase-like protein | MSMEG_2246 Uncharacterized protein |
| MSMEG_2395 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) | MSMEG_2247 Dihydrokaempferol 4-reductase (NAD-dependent epimerase/dehydratase) (EC 1.1.1.219) |
| MSMEG_2670 Thymidylate synthase (TS) (TSase) (EC 2.1.1.45) | MSMEG_3289 Gp61 protein |
| MSMEG_5553 CheR methyltransferase, SAM binding domain protein (EC 2.1.1.80) | MSMEG_4278 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) |
| MSMEG_2842 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) (Putative nitrilotriacetate monooxygenase) | MSMEG_2980 Branched-chain amino acid ABC transporter permease protein (Putative membrane protein) |
| MSMEG_3594 Anthranilate dioxygenase reductase (Ferredoxin reductase) |
Bedaquiline.vs..DMSO.30min
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
Plogcy5plogcy3slide110norm
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Biological.replicate.5.of.6..negative.control
Biological.replicate.4.of.6..kanamycin.treatment
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
Sub.MIC.INH
Slow.vs..Fast.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Wild.type.rep2.y
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.4.of.6..negative.control
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
dosR.WT_Replicate3
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Biological.replicate.5.of.6..kanamycin.treatment
Wild.type.rep2.x
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
Comments
Log in to post comments