Module 631 Residual: 0.48
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.48 | 140 | 11000 | 74 | 33 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 140 | |
| Motif 2 |
 |
| e-value: 11000 |
| MSMEG_3138 Thioredoxin (Thioredoxin TrxB1) | MSMEG_2849 Transcriptional regulator, HxlR family (Transcriptional regulatory protein) |
| MSMEG_2357 Cysteine desulfurase (EC 2.8.1.7) | MSMEG_2438 tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) |
| MSMEG_3137 NADH:flavin oxidoreductase/NADH oxidase (Oxidoreductase) | MSMEG_3375 Alcohol dehydrogenase (Glucose-methanol-choline oxidoreductase:FAD dependentoxidoreductase:GMC oxidoreductase) (EC 1.1.99.1) |
| MSMEG_3650 Integral membrane protein | MSMEG_4220 Uncharacterized protein |
| MSMEG_3355 NmrA family protein (Uncharacterized protein) | MSMEG_4221 Laccase domain protein |
| MSMEG_2573 Uncharacterized protein | MSMEG_5603 Transcriptional regulator, ArsR family protein |
| MSMEG_0820 Uncharacterized protein | MSMEG_4907 Mov34/MPN/PAD-1 (Mov34/MPN/PAD-1 family protein) |
| MSMEG_0822 Cytochrome P450 (Cytochrome P450 185A4 Cyp185A4) | MSMEG_4906 ThiS family protein |
| MSMEG_2028 Chloramphenicol resistance protein (Major facilitator superfamily MFS_1) | MSMEG_4905 Cysteine synthase B (EC 2.5.1.47) |
| MSMEG_2029 3-ketoacyl-ACP/CoA redutase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_4904 Rhomboid family protein |
| MSMEG_1746 6-hydroxy-D-nicotine oxidase (EC 1.5.3.6) (Uncharacterized protein) | MSMEG_3511 Hydroxylase (Uncharacterized protein) |
| MSMEG_4974 Rrf2 family protein (Putative transcriptional regulator) (Transcriptional regulator, BadM/Rrf2 family) | MSMEG_1464 Endoribonuclease L-PSP (Translation initiation inhibitor) |
| MSMEG_1745 TetR-family transcriptional regulator (Transcriptional regulator) | MSMEG_4219 Cell division protein SepF |
| MSMEG_2358 tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-) | MSMEG_6652 Uncharacterized protein |
| MSMEG_2435 30S ribosomal protein S16 | MSMEG_2917 Uncharacterized protein |
| MSMEG_2437 Ribosome maturation factor RimM | MSMEG_5162 Cinnamoyl ester hydrolase (Transcriptional regulator, HxlR family) |
| MSMEG_2436 UPF0109 protein MSMEG_2436 |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
dcpA.knockout.rep2
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
Bedaquiline.vs..DMSO.30min
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Wild.type.rep2.y
Wild.type.rep1.y
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
stphcy3plogcy5slide581norm
Biological.replicate.5.of.7..panaxydol.treatment
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
Biological.replicate.5.of.6..negative.control
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
WT_stationary.phase_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.1.of.7..panaxydol.treatment
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
dosR.WT_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.5.of.7..falcarinol.treatment
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