Module 632 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 5.7e-20 | 0.00000000043 | 79 | 27 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5.7e-20 | |
| Motif 2 |
 |
| e-value: 0.00000000043 |
| MSMEG_6847 Putative alanine-rich protein (Uncharacterized protein) | MSMEG_2195 Transcriptional regulator, TetR family protein |
| MSMEG_3724 Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) | MSMEG_1511 Nitroreductase (Putative oxidoreductase) |
| MSMEG_6843 NAD-dependent epimerase/dehydratase | MSMEG_2193 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_5461 Uncharacterized protein | MSMEG_6763 Alpha/beta hydrolase fold protein (EC 3.8.1.5) (Oxidoreductase) |
| MSMEG_5460 Uncharacterized protein | MSMEG_4517 TetR-type transcriptional regulator of sulfur metabolism |
| MSMEG_3421 Inner membrane metabolite transport protein YdfJ (Major facilitator superfamily MFS_1) | MSMEG_6764 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_3420 Gluconate 5-dehydrogenase (EC 1.1.1.69) | MSMEG_0523 DNA-binding protein (Transcriptional regulator, XRE family) |
| MSMEG_3422 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding) | MSMEG_6189 Crp/Fnr familytranscriptional regulator (Transcriptional regulator, Crp/Fnr family protein) |
| MSMEG_0664 FAD dependent oxidoreductase | MSMEG_1564 Carotenoid oxygenase (Lignostilbene-alpha,beta-dioxygenase) |
| MSMEG_0663 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) | MSMEG_1565 Transcriptional regulator, TetR family protein (Transcriptional regulatory protein (Possibly TetR-family)) |
| MSMEG_3725 Coenzyme PQQ biosynthesis protein A (Uncharacterized protein) | MSMEG_1509 TetR-family protein transcriptional regulator (Transcriptional regulator, TetR family) |
| MSMEG_0118 Uncharacterized protein | MSMEG_4331 LysR family transcriptional regulator (Putative transcriptional regulator) |
| MSMEG_1221 Rifampin ADP-ribosyl transferase | MSMEG_3812 Acyl-CoA thioesterase |
| MSMEG_5498 Uncharacterized protein |
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
dcpA.knockout.rep2
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
Wild.type.rep2.y
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
Biological.replicate.2.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Plogcy5plogcy3slide113norm
Biological.replicate.7.of.7..panaxydol.treatment
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
Biological.replicate.3.of.6..kanamycin.treatment
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
WT_stationary.phase_rep2
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Biological.replicate.1.of.7..panaxydol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
dosR.WT_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.1.of.6..kanamycin.treatment
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