Module 634 Residual: 0.47
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.47 | 3.9e-18 | 4e-25 | 80 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.9e-18 | |
| Motif 2 |
 |
| e-value: 4e-25 |
| MSMEG_4569 Uncharacterized protein | MSMEG_0950 Uncharacterized protein |
| MSMEG_3241 Uncharacterized protein | MSMEG_0952 Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70) |
| MSMEG_0159 Formate dehydrogenase, gamma subunit (EC 1.2.1.2) | MSMEG_0953 Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (Pre-uroporphyrinogen synthase) |
| MSMEG_3099 6-phosphogluconolactonase (EC 3.1.1.31) (6-phosphogluconolactonase DevB) (EC 3.1.1.31) | MSMEG_0954 Uroporphyrinogen-III synthase (EC 4.2.1.75) |
| MSMEG_0984 Trap transporter, 4tm/12tm fusion protein | MSMEG_0956 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
| MSMEG_1102 Amidohydrolase 3 (Twin-arginine translocation pathway signal) | MSMEG_3329 Uncharacterized protein |
| MSMEG_4486 Transcriptional regulator, ArsR family protein | MSMEG_3102 Transaldolase (EC 2.2.1.2) |
| MSMEG_4487 Ferric uptake regulation protein (Zinc uptake regulator, Fur family) | MSMEG_3103 Transketolase (EC 2.2.1.1) |
| MSMEG_4485 Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) | MSMEG_3100 OpcA protein (Oxppcycle protein OpcA) |
| MSMEG_0255 Phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (PEPCK) (EC 4.1.1.32) | MSMEG_3101 Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49) |
| MSMEG_5175 NAD-dependent protein deacylase Sir2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog) | MSMEG_3104 Uncharacterized protein |
| MSMEG_5174 Regulatory protein GntR, HTH | MSMEG_3105 Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase) |
| MSMEG_1209 Glycosidase | MSMEG_1356 Uncharacterized protein |
| MSMEG_1208 Glycosyltransferase, group I | MSMEG_0161 Formate dehydrogenase, alpha subunit (EC 1.2.1.2) |
| MSMEG_0982 Immunogenic protein | MSMEG_4310 Cobalamin biosynthesis protein CobD (EC 6.3.1.10) |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
X4XR.rep1
Biological.replicate.2.of.7..falcarinol.treatment
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Bedaquiline.vs..DMSO.60min
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
Biological.replicate.2.of.7..ethambutol.treatment
X2.5..vs..50..air.saturation.Replicate.1
WT_stationary.phase_rep2
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
WT.with.vs..without.N_dye.swap_rep2
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