Module 638 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.0000000000000054 | 1200 | 80 | 33 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000054 | |
| Motif 2 |
 |
| e-value: 1200 |
| MSMEG_5102 ABC transporter ATP-binding protein (ABC transporter related protein) | MSMEG_0238 CoA binding domain protein (O-acetylhomoserine/O-acetylserine sulfhydrylase) |
| MSMEG_4910 ATP-dependent Clp protease adapter protein ClpS | MSMEG_5218 Putative ester cyclase (Uncharacterized protein) |
| MSMEG_4911 Nicotinate phosphoribosyltransferase (EC 6.3.4.21) | MSMEG_5253 Uncharacterized protein |
| MSMEG_4912 Putative ATP-dependent DNA helicase (Putative helicase) | MSMEG_1989 Phenoxybenzoate dioxygenase beta subunit (EC 1.-.-.-) |
| MSMEG_5086 Fatty-acid-CoA ligase FadD6 (EC 2.3.1.86) (Very-long-chain acyl-CoA synthetase) (EC 6.2.1.-) (EC 6.2.1.3) | MSMEG_6787 Ribose 5-phosphate isomerase (EC 5.3.1.6) |
| MSMEG_6319 Penicillin-binding protein (Penicillin-binding protein, transpeptidase) | MSMEG_6785 Triosephosphate isomerase (EC 5.3.1.1) |
| MSMEG_0591 Carbohydrate kinase FGGY (Rhamnulokinase) (EC 2.7.1.5) | MSMEG_2133 Uncharacterized protein |
| MSMEG_0886 Serine/threonine-protein kinase PknD (Serine/threonine-protein kinase pknF) (EC 2.7.11.1) | MSMEG_2347 Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene desaturase) (EC 5.4.99.9) |
| MSMEG_0887 Uncharacterized protein | MSMEG_2346 Phytoene synthase (EC 2.5.1.-) (EC 2.5.1.32) |
| MSMEG_0885 Twin-arginine translocation pathway signal (Uncharacterized protein) | MSMEG_4909 Putative transcriptional regulatory protein (Uncharacterized protein) |
| MSMEG_5030 Uncharacterized protein | MSMEG_2344 Dehydrogenase |
| MSMEG_1787 RsbW protein | MSMEG_1327 RecBCD enzyme subunit RecB (EC 3.1.11.5) (Exonuclease V subunit RecB) (ExoV subunit RecB) (Helicase/nuclease RecBCD subunit RecB) |
| MSMEG_1328 RecBCD enzyme subunit RecC (EC 3.1.11.5) (Exonuclease V subunit RecC) (ExoV subunit RecC) (Helicase/nuclease RecBCD subunit RecC) | MSMEG_6548 Rieske (2Fe-2S) region (EC 1.10.9.1) (Rieske iron-sulfur protein) |
| MSMEG_2343 Methylesterase | MSMEG_0239 O-acetylhomoserine/O-acetylserine sulfhydrylase (EC 2.5.1.49) |
| MSMEG_1325 RecBCD enzyme subunit RecD (EC 3.1.11.5) (Exonuclease V subunit RecD) (ExoV subunit RecD) (Helicase/nuclease RecBCD subunit RecD) | MSMEG_6506 Nicotinamidase/pyrazinamidase (Pyrazinamidase/nicotinamidase) (EC 3.5.1.19) |
| MSMEG_4908 Endo-type 6-aminohexanoate oligomer hydrolase (Peptidase S58 DmpA) | MSMEG_5905 Uncharacterized protein |
| MSMEG_6831 Alpha/beta hydrolase fold protein (Hydrolase, alpha/beta hydrolase fold family protein) |
KO_stationary.phase_rep1
Biological.replicate.5.of.7..falcarinol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
X4XR.rep1
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep3
Plogcy5plogcy3slide113norm
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
Biological.replicate.2.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_rep1
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.1.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
Biological.replicate.3.of.6..negative.control
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Wild.type.rep2.x
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
dosR.WT_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DamtR.N.surplus_.dyeswap_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.4.of.6..kanamycin.treatment
X4dbfcy3plogcy5slide903norm
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