Module 653 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.0000014 | 0.0000004 | 77 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000014 | |
| Motif 2 |
 |
| e-value: 0.0000004 |
| MSMEG_4204 Catalase (Uncharacterized protein) | MSMEG_1135 Uncharacterized protein |
| MSMEG_0255 Phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (PEPCK) (EC 4.1.1.32) | MSMEG_4178 Flavodoxin/nitric oxide synthase |
| MSMEG_4130 Polysaccharide deacetylase (Polysaccharide deacetylase family protein) | MSMEG_6429 Uncharacterized protein |
| MSMEG_4039 Aryl-alcohol dehydrogenase (EC 1.1.1.90) | MSMEG_5283 Hydrolase, CocE/NonD family protein |
| MSMEG_4038 Vanillin dehydrogenase | MSMEG_5282 TetR-family transcriptional regulator (Transcriptional regulator) |
| MSMEG_3132 DNA-binding protein (Transcriptional regulator, XRE family) | MSMEG_4390 Uncharacterized protein |
| MSMEG_1561 LysR-family protein trancsriptional regulator (LysR-family transcriptional regulator) | MSMEG_3903 Low molecular weight antigen CFP2 (Low molecular weight protein antigen 2) (CFP-2) (Low molecular weight antigen MTB12) |
| MSMEG_1863 | MSMEG_1303 Putative transcriptional regulator |
| MSMEG_1862 Transposase | MSMEG_1304 Aldo/keto reductase (EC 1.1.1.91) (Rhizopine catabolism protein) |
| MSMEG_1455 Drug resistance transporter EmrB/QacA subfamily (Putative multidrug resistance protein) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Mycobacterium.smegmatis.Spheroplast.induced
Plogcy5plogcy3slide110norm
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
dosR.WT_Replicate2
Biological.replicate.4.of.6..kanamycin.treatment
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
MB100pruR.vs..MB100.rep.2
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Plogcy5plogcy3slide113norm
Wild.type.rep2.y
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.4.of.6..negative.control
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
stphcy5plogcy3slide487norm
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.3.of.6..negative.control
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