Module 658 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.0000000000000022 | 0.00000000014 | 80 | 35 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000022 | |
| Motif 2 |
 |
| e-value: 0.00000000014 |
| MSMEG_3423 IclR family transcriptional regulator (Probable IclR family protein regulator) | MSMEG_1196 SNF2 domain protein (Uncharacterized protein) |
| MSMEG_6848 Putative oxidoreductase (Short-chain dehydrogenase/reductase SDR) | MSMEG_1960 Uncharacterized protein |
| MSMEG_0687 Uncharacterized protein | MSMEG_1961 Uncharacterized protein |
| MSMEG_0820 Uncharacterized protein | MSMEG_4149 Acetaldehyde dehydrogenase 1 (EC 1.2.1.10) (Acetaldehyde dehydrogenase [acetylating] 1) |
| MSMEG_4421 Uncharacterized protein | MSMEG_4148 Lipase |
| MSMEG_0822 Cytochrome P450 (Cytochrome P450 185A4 Cyp185A4) | MSMEG_5988 Uncharacterized protein |
| MSMEG_5343 Uncharacterized protein | MSMEG_5989 PPE family protein (Uncharacterized protein) |
| MSMEG_4150 4-hydroxy-2-oxovalerate aldolase 1 (HOA 1) (EC 4.1.3.39) (4-hydroxy-2-keto-pentanoic acid aldolase 1) (4-hydroxy-2-oxopentanoate aldolase 1) | MSMEG_2264 Hydrogenase maturation protease (Peptidase M52, hydrogen uptake protein) |
| MSMEG_0412 PE (PE family protein) (Uncharacterized protein) | MSMEG_2266 Uncharacterized protein |
| MSMEG_0628 Amidohydrolase 2 (Amidohydrolase family protein) | MSMEG_4598 Putative conserved lipoprotein lpph |
| MSMEG_0629 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) | MSMEG_2262 Hydrogenase-2, small subunit (EC 1.12.99.6) (NADH ubiquinone oxidoreductase 20 kDa subunit) (EC 1.12.99.6) |
| MSMEG_6372 GtrA-like protein (Membrane protein) | MSMEG_2263 Hydrogenase-2, large subunit (EC 1.12.99.6) (Nickel-dependent hydrogenase large subunit) (EC 1.12.5.1) |
| MSMEG_0411 Acyl-CoA synthase (FadD28) | MSMEG_0147 C-5 sterol desaturase (EC 1.3.-.-) (Sterol desaturase-related protein) |
| MSMEG_6596 Uncharacterized protein | MSMEG_2644 Putative hydrolase (X-Pro dipeptidyl-peptidase-like protein) |
| MSMEG_6597 Hydrolase of the alpha/beta superfamily protein (OsmC-like family protein) | MSMEG_2627 Uncharacterized protein |
| MSMEG_2242 Aldehyde dehydrogenase | MSMEG_0007 Putative conserved membrane protein (Uncharacterized protein) |
| MSMEG_2240 Cytochrome P450 (Cytochrome P450 187A4 Cyp187A4) | MSMEG_6412 Uncharacterized protein |
| MSMEG_1962 Uncharacterized protein |
Wild.type.rep1.y
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.1.of.6..negative.control
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.3
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Plogcy5plogcy3slide113norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_dye.swap_rep2
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Bedaquiline.vs..DMSO.120min
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