Module 668 Residual: 1.00Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
1.00			77	0	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

Conditions

KO_stationary.phase_rep1

KO_stationary.phase_rep2

WT.vs..DamtR.without.N_rep1

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Bedaquiline.vs..DMSO.15min

M..smegmatis.Acid.NO.treated

Wild.type.rep2.x

Biological.replicate.3.of.7..ethambutol.treatment

MB100pruR.vs..MB100..rep.3

dosR.WT_Replicate2

Biological.replicate.5.of.6..negative.control

KO_log.phase_rep2

KO_log.phase_rep1

dosR.WT_Replicate4

MB100pruR.vs..MB100.rep.2

WT.vs..DamtR.without.N_.dyeswap_rep2

MB100pruR.vs..MB100.rep.1

Biological.replicate.7.of.7..ethambutol.treatment

Biological.replicate.1.of.7..ethambutol.treatment

Biological.replicate.6.of.6..kanamycin.treatment

Bedaquiline.vs..DMSO..45min

Biological.replicate.6.of.6..negative.control

DamtR.with.vs..DamtR.without.N_.rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

Biological.replicate.3.of.6..isoniazid.treatment

Biological.replicate.5.of.6..kanamycin.treatment

WT_log.phase_rep2

Biological.replicate.4.of.6..kanamycin.treatment

WT.vs..DamtR.N.surplus_rep2

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

stphcy5plogcy3slide487norm

Wild.type.rep2.y

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.2.of.7..ethambutol.treatment

mc2155.vs.Dcrp1.replicate.4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

dcpA.knockout.rep2

dcpA.knockout.rep1

Plogcy5plogcy3slide111norm

stphcy5plogcy3slide580norm

X2.5..vs..50..air.saturation.Replicate.4

X2.5..vs..50..air.saturation.Replicate.5

X3dbfcy3plogcy5slide607norm

WT_log.phase_rep1

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.1

X2.5..vs..50..air.saturation.Replicate.2

X2.5..vs..50..air.saturation.Replicate.3

WT_stationary.phase_rep1

Biological.replicate.2.of.7..panaxydol.treatment

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

Biological.replicate.6.of.6..isoniazid.treatment

Biological.replicate.2.of.6..isoniazid.treatment

Slow.vs..Fast.Replicate.4

WT.with.vs..without.N_dye.swap_rep2

Biological.replicate.5.of.6..isoniazid.treatment

Biological.replicate.6.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X3dbfcy5plogcy3slide603norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

WT.vs..DglnR.N_starvation_rep2

DglnR_without.vs..with.N_dyeswap_rep2

Biological.replicate.1.of.7..falcarinol.treatment

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

BatchCulture_LBTbroth_StationaryPhase_Replicate4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate3

BatchCulture_LBTbroth_StationaryPhase_Replicate1

Biological.replicate.2.of.6..kanamycin.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

Biological.replicate.3.of.6..negative.control

Bedaquiline.vs..DMSO.120min

Comments