Module 675 Residual: 0.61Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.61	0.33	6500	74	21	20160204

Motifs

Motif 1
	e-value: 0.33
Motif 2
	e-value: 6500

Module Plots

Members

MSMEG_6303 Carboxylic ester hydrolase (EC 3.1.1.-)	MSMEG_3276 Integral membrane protein (Putative integral membrane protein (DMT superfamily))
MSMEG_5039 Siderophore-interacting protein	MSMEG_5327 Uncharacterized protein
MSMEG_6317 Lipolytic enzyme, G-D-S-L	MSMEG_3476 Peptidase M48, Ste24p (Peptidase, M48 family protein) (EC 3.4.24.-)
MSMEG_2800 NADPH-dependent FMN reductase (NADPH-dependent fmn reductase)	MSMEG_4807 Amidohydrolase family protein
MSMEG_6305 Uncharacterized protein	MSMEG_3663 Oxidoreductase
MSMEG_4611 Carrier protein (Dicarboxylate carrier MatC domain protein)	MSMEG_6834 Alcohol dehydrogenase (Alcohol dehydrogenase (ADH-HT) oxidoreductase-like protein) (EC 1.1.1.1)
MSMEG_3555 Hydrolase (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase) (EC 3.5.1.6)	MSMEG_5255 Conserved hypothetical transmembrane protein (Uncharacterized protein)
MSMEG_4634 Uncharacterized protein	MSMEG_5217 Uncharacterized protein
MSMEG_4445 Uncharacterized protein	MSMEG_2817 ABC efflux pump, fused inner membrane and ATPase subunits (Uncharacterized protein)
MSMEG_6732 Integral membrane protein (Uncharacterized protein)	MSMEG_4555 Lipoprotein lppR (LppR protein)
MSMEG_3323 Uncharacterized protein

Conditions

Biological.replicate.5.of.7..falcarinol.treatment

WT.vs..DamtR.without.N_rep1

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

DamtR.with.vs..DamtR.without.N_.rep1

dosR.WT_Replicate4

Biological.replicate.4.of.6..isoniazid.treatment

MB100pruR.vs..MB100..rep.3

dosR.WT_Replicate1

KO_log.phase_rep2

KO_log.phase_rep1

Plogcy5plogcy3slide110norm

Wild.type.rep1.x

Wild.type.rep1.y

MB100pruR.vs..MB100.rep.4

Biological.replicate.3.of.7..panaxydol.treatment

Biological.replicate.6.of.6..negative.control

DglnR_without.vs..with.N_rep2

WT.vs..DamtR.without.N_.dyeswap_rep2

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.7.of.7..ethambutol.treatment

Biological.replicate.6.of.6..kanamycin.treatment

Biological.replicate.3.of.7..falcarinol.treatment

rel.knockout.rep1

Bedaquiline.vs..DMSO..45min

Biological.replicate.6.of.7..falcarinol.treatment

Biological.replicate.7.of.7..falcarinol.treatment

Biological.replicate.3.of.7..ethambutol.treatment

Biological.replicate.3.of.6..isoniazid.treatment

Biological.replicate.5.of.6..kanamycin.treatment

Biological.replicate.2.of.6..kanamycin.treatment

Biological.replicate.4.of.6..kanamycin.treatment

X0.6..vs..50..air.saturation.Replicate.5

WT.vs..DamtR.N.surplus_rep2

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

mc2155.vs.Dcrp1.replicate.2

Plogcy5plogcy3slide113norm

mc2155.vs.Dcrp1.replicate.1

Biological.replicate.3.of.6..negative.control

X3dbfcy5plogcy3slide603norm

Biological.replicate.5.of.6..negative.control

X2.5..vs..50..air.saturation.Replicate.5

WT_log.phase_rep1

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.1

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

WT_stationary.phase_rep2

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.6.of.6..isoniazid.treatment

Biological.replicate.2.of.6..isoniazid.treatment

Tet.CarD.vs.Control..Replicates.1..2..and.3.

dosR.WT_Replicate3

Biological.replicate.5.of.6..isoniazid.treatment

WT.vs..DglnR.N_starvation_dye.swap_rep1

WT.vs..DglnR.N_starvation_dye.swap_rep2

Biological.replicate.3.of.6..kanamycin.treatment

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X4dbfcy5plogcy3slide480norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

X4dbfcy5plogcy3slide901norm

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

WT.vs..DglnR.N_starvation_rep1

WT.with.vs..without.N_rep1

DglnR_without.vs..with.N_dyeswap_rep2

Biological.replicate.1.of.6..negative.control

X2XR.rep2

BatchCulture_LBTbroth_StationaryPhase_Replicate4

Sub.MIC.INH

BatchCulture_LBTbroth_StationaryPhase_Replicate2

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

Biological.replicate.2.of.6..negative.control

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

X4dbfcy3plogcy5slide903norm

Biological.replicate.6.of.7..panaxydol.treatment

Comments