Module 3 Residual: 0.60
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.60 | 5.4e-30 | 0.0021 | 83 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5.4e-30 | |
| Motif 2 |
 |
| e-value: 0.0021 |
| MSMEG_1881 Protein translocase subunit SecA 1 | MSMEG_2135 Putative fluoride ion transporter CrcB |
| MSMEG_4318 Uncharacterized protein | MSMEG_0936 Signal-transduction histidine kinase senX3 (EC 2.7.13.3) |
| MSMEG_4914 Virginiamycin B lyase (EC 4.2.99.-) (Streptogramin B lyase) | MSMEG_0937 Sensory transduction protein regX3 |
| MSMEG_4915 Alpha-1,4 glucan phosphorylase (EC 2.4.1.1) | MSMEG_4921 Methylmalonyl CoA epimerase (EC 5.1.99.1) (Methylmalonyl-CoA epimerase) (EC 5.1.99.1) |
| MSMEG_4916 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase (GMPMT) (EC 2.4.99.16) ((1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase) | MSMEG_4920 Probable acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) |
| MSMEG_4918 1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Glycogen-branching enzyme) (BE) | MSMEG_2136 Phosphoglucomutase PgmA (EC 5.4.2.2) (Phosphoglucomutase, alpha-D-glucose phosphate-specific) (EC 5.4.2.2) |
| MSMEG_2134 Putative fluoride ion transporter CrcB | MSMEG_2137 Permease of the major facilitator superfamily protein |
| MSMEG_2756 Uncharacterized protein | MSMEG_0103 Major facilitator family protein transporter (Major facilitator superfamily MFS_1) |
| MSMEG_2757 Glutathione S-transferase domain protein | MSMEG_3954 Trehalose 6-phosphate phosphorylase |
| MSMEG_1879 Uncharacterized protein | MSMEG_3951 3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III C terminal (EC 2.3.1.41) (Uncharacterized protein) |
| MSMEG_3305 Integral membrane protein DUF6 (Uncharacterized protein) | MSMEG_3953 Uncharacterized protein |
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.2.of.7..falcarinol.treatment
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
stphcy5plogcy3slide487norm
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.7..ethambutol.treatment
X4XR.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
Biological.replicate.2.of.6..isoniazid.treatment
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
WT.vs..DamtR.N.surplus_rep2
Bedaquiline.vs..DMSO.120min
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