Module 23 Residual: 0.49
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.49 | 320 | 24000 | 74 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 320 | |
| Motif 2 |
 |
| e-value: 24000 |
| MSMEG_5650 AMP-dependent synthetase and ligase (EC 6.2.1.1) | MSMEG_6587 ATP-dependent helicase HrpA |
| MSMEG_5107 Conserved hypothetical exported protein (Secreted protein) | MSMEG_0325 Uncharacterized protein |
| MSMEG_5109 Uncharacterized protein | MSMEG_0324 Uncharacterized protein |
| MSMEG_0948 UPF0336 protein MSMEG_0948 | MSMEG_5966 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_4425 Nitroreductase (Putative oxidoreductase) | MSMEG_6205 Uncharacterized protein |
| MSMEG_0326 AMP-dependent synthetase and ligase (EC 2.3.1.86) | MSMEG_1277 Antitoxin Phd |
| MSMEG_1341 MaoC family protein (MaoC-like dehydratase) | MSMEG_1270 Uncharacterized protein |
| MSMEG_1323 Uncharacterized protein | MSMEG_1271 Uncharacterized protein |
| MSMEG_2808 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) | MSMEG_6286 Putative aminotransferase MSMEG_6286/MSMEI_6121 |
| MSMEG_5649 Acyl-CoA synthase (Fatty-acid-CoA ligase FadD35) | MSMEG_1313 Secreted protein |
| MSMEG_0813 Uncharacterized protein | MSMEG_4217 Cell wall synthesis protein Wag31 (Antigen 84) |
| MSMEG_0283 3-oxoacyl-[acyl-carrier-protein] reductase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_1278 Toxin Doc (Death on curing protein) |
| MSMEG_0815 Transcriptional regulator, TetR family protein | MSMEG_3628 ComA operon protein 2 |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..negative.control
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.5.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.7..falcarinol.treatment
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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