Module 25 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 1.5 | 890 | 76 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.5 | |
| Motif 2 |
 |
| e-value: 890 |
| MSMEG_6931 RNA polymerase sigma-70 factor | MSMEG_6720 Epoxide hydrolase |
| MSMEG_3179 Pyridoxamine 5'-phosphate oxidase family protein | MSMEG_4745 ErfK/YbiS/YcfS/YnhG family protein |
| MSMEG_6151 Alpha/beta hydrolase fold protein (Alpha/beta hydrolase fold-1) | MSMEG_5455 Pe family protein |
| MSMEG_2893 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region (EC 1.-.-.-) (Oxidoreductase, NAD/FAD-binding) | MSMEG_3340 Uncharacterized protein |
| MSMEG_2892 Pigment production hydroxylase (EC 1.-.-.-) | MSMEG_6150 4-carboxymuconolactone decarboxylase |
| MSMEG_5599 Uncharacterized protein | MSMEG_0948 UPF0336 protein MSMEG_0948 |
| MSMEG_1990 Conserved hypothetical cytosolic protein (Uncharacterized protein) | MSMEG_4143 Uncharacterized protein |
| MSMEG_2796 Integral membrane protein | MSMEG_2017 DNA binding domain, excisionase family (Transcriptional regulator, MerR family protein) |
| MSMEG_3098 Uncharacterized protein | MSMEG_2016 Molybdate ABC transporter, periplasmic molybdate-binding protein |
| MSMEG_0191 BadF/BadG/BcrA/BcrD ATPase family protein | MSMEG_2015 ABC-type transporter, permease components (EC 3.6.3.29) (Molybdate ABC transporter, permease protein) |
| MSMEG_4480 Uncharacterized protein | MSMEG_2014 ABC transporter ATP-binding protein (EC 3.6.3.-) (Molybdenum import ATP-binding protein ModC) (EC 3.6.3.29) |
| MSMEG_1786 Stas domain, putative | MSMEG_3180 Regulatory protein, MerR (Transcriptional regulator, MerR family protein) |
| MSMEG_5456 LpqN (MK35 lipoprotein) | MSMEG_2426 Nitrogen regulatory protein P-II |
| MSMEG_3274 MerR-family protein transcriptional regulator (Transcriptional regulator, MerR family) | MSMEG_2645 Uncharacterized protein |
| MSMEG_3273 Glutamyl aminopeptidase, M42 family protein | MSMEG_4596 Uncharacterized protein |
| MSMEG_6721 Uncharacterized protein |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
KO_log.phase_rep1
Biological.replicate.5.of.7..panaxydol.treatment
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Bedaquiline.vs..DMSO.30min
X2XR.rep1
MB100pruR.vs..MB100..rep.3
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep1
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.1.of.6..negative.control
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy5plogcy3slide487norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.4.of.6..negative.control
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
WT.vs..DamtR.N.surplus_rep1
Biological.replicate.5.of.6..negative.control
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep1
X4XR.rep2
Biological.replicate.2.of.7..falcarinol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
X4dbfcy5plogcy3slide480norm
Wild.type.rep3
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Sub.MIC.INH
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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