Module 44 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 4.9e-25 | 0.000000016 | 78 | 33 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4.9e-25 | |
| Motif 2 |
 |
| e-value: 0.000000016 |
| MSMEG_6095 D-amino acid deaminase | MSMEG_3940 Universal stress protein family protein (UspA) |
| MSMEG_6094 Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) | MSMEG_1167 Cytochrome P450 |
| MSMEG_0842 Uncharacterized protein | MSMEG_4329 Acetyl/propionyl-CoA carboxylase (Beta subunit) AccD6 (EC 6.4.1.3) (Propionyl-CoA carboxylase beta chain) (EC 6.4.1.3) |
| MSMEG_3356 Uncharacterized protein | MSMEG_5502 AAA ATPase containing von Willebrand factor type A (VWA) domain-like protein (Uncharacterized protein) |
| MSMEG_6678 Uncharacterized protein | MSMEG_6274 Uncharacterized protein |
| MSMEG_0926 Uncharacterized protein | MSMEG_3218 Trp region conserved hypothetical membrane protein |
| MSMEG_2554 Aminoglycoside phosphotransferase (Phosphotransferase enzyme family protein) | MSMEG_4415 Transaldolase (EC 2.2.1.2) |
| MSMEG_3880 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein) | MSMEG_1634 FHA domain containing protein (Probable forkhead-associated protein) |
| MSMEG_6273 Integral membrane protein | MSMEG_1632 Uncharacterized protein |
| MSMEG_0722 Uncharacterized protein | MSMEG_4044 GAF domain protein |
| MSMEG_1551 Uncharacterized protein | MSMEG_5415 Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase) |
| MSMEG_0197 NUDIX hydrolase (Nudix hydrolase) | MSMEG_2013 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_1344 Preprotein translocase secE1 (Translocase) | MSMEG_3937 Conserved hypothetical membrane protein (Uncharacterized protein) |
| MSMEG_1346 50S ribosomal protein L11 | MSMEG_3936 Universal stress protein family protein |
| MSMEG_1168 Putative transcriptional regulator | MSMEG_3939 Universal stress protein family protein (UspA) |
| MSMEG_1345 Transcription termination/antitermination protein NusG | MSMEG_2911 Integral membrane transport protein (Major facilitator superfamily MFS_1) |
| MSMEG_6271 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
Biological.replicate.5.of.7..panaxydol.treatment
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.4.of.7..ethambutol.treatment
dosR.WT_Replicate2
Biological.replicate.4.of.6..kanamycin.treatment
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
Biological.replicate.3.of.6..kanamycin.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.2.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
X4XR.rep2
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep1.y
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
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