Module 92 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 7.90052e-42 | 0.00000037 | 83 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 7.90052e-42 | |
| Motif 2 |
 |
| e-value: 0.00000037 |
| MSMEG_6860 Uncharacterized protein | MSMEG_5332 Transcriptional regulator, TetR family protein |
| MSMEG_1066 Uncharacterized protein | MSMEG_4125 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_1065 Uncharacterized protein | MSMEG_1611 Putative transcriptional regulatory protein (Transcriptional regulator, TetR family protein, putative) |
| MSMEG_1064 Low-affinity inorganic phosphate transporter, PitA (Phosphate/sulphate permease) | MSMEG_4126 Hydrolase, isochorismatase family protein |
| MSMEG_4011 Putative pyrimidine permease RutG (Uracil-xanthine permease) | MSMEG_4534 Putative conserved membrane protein (Uncharacterized protein) |
| MSMEG_4010 Glyoxalase family protein (Uncharacterized protein) | MSMEG_4535 Trehalase (EC 3.2.1.28) (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) |
| MSMEG_4012 D-hydantoinase (Dihydropyrimidinase) (DHPase) (EC 3.5.2.2) (Dihydropyrimidinase) | MSMEG_1544 PduO protein (Protein glcG) |
| MSMEG_4871 3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.178) (EC 1.1.1.35) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) | MSMEG_1610 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase) |
| MSMEG_1516 Thioredoxin reductase | MSMEG_4846 Probable enoyl-CoA hydratase (EC 4.2.1.17) |
| MSMEG_1515 Two-component sensor histidine kinase (Uncharacterized protein) | MSMEG_4847 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_6817 RNA polymerase ECF-subfamily sigma factor (RNA polymerase sigma factor, sigma-70 family protein) | MSMEG_0586 Stas domain, putative |
| MSMEG_6818 Dehydrogenase (FAD-dependent pyridine nucleotide-disulfide oxidoreductase) | MSMEG_4869 LAO/AO transport system ATPase (EC 2.7.-.-) |
| MSMEG_5333 Uncharacterized protein | MSMEG_5968 Polysaccharide biosynthesis protein |
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Plogcy5plogcy3slide110norm
Bedaquiline.vs..DMSO.30min
Biological.replicate.2.of.7..falcarinol.treatment
dosR.WT_Replicate2
KO_log.phase_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Biological.replicate.6.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.4.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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