Module 100 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.0000000000000061 | 0.001 | 76 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000061 | |
| Motif 2 |
 |
| e-value: 0.001 |
| MSMEG_3522 Dopamine receptor D4 (Uncharacterized protein) | MSMEG_1903 Caib/baif family protein (L-carnitine dehydratase/bile acid-inducible protein F) |
| MSMEG_3524 Linalool 8-monooxygenase (EC 1.14.13.151) | MSMEG_1904 Acyl-CoA dehydrogenase (Putative acyl-CoA dehydrogenase) |
| MSMEG_3354 TetR family protein transcriptional regulatory protein (TetR-family transcriptional regulator) | MSMEG_1905 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase protein) |
| MSMEG_5434 Uncharacterized protein | MSMEG_5601 Uncharacterized protein |
| MSMEG_4810 Uncharacterized protein | MSMEG_5192 Aldo/keto reductase (EC 1.1.1.91) |
| MSMEG_2693 Competence-damaged protein (Competence-inducible (CinA-like) protein) | MSMEG_5190 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) |
| MSMEG_3633 Ferric cations import ATP-binding protein FbpC (Iron(III) ABC transporter, ATP-binding protein) (EC 3.6.3.30) | MSMEG_4808 Amidohydrolase family protein |
| MSMEG_2435 30S ribosomal protein S16 | MSMEG_4809 Rieske (2Fe-2S) region (EC 1.-.-.-) (Rieske [2Fe-2S] domain, putative) |
| MSMEG_2437 Ribosome maturation factor RimM | MSMEG_4806 Acyl-CoA dehydrogenase (Putative acyl-CoA dehydrogenase) |
| MSMEG_2436 UPF0109 protein MSMEG_2436 | MSMEG_4805 Acyl-CoA dehydrogenase |
| MSMEG_3635 Iron(III)-transport system permease protein SfuB | MSMEG_2527 Uncharacterized protein |
| MSMEG_3636 Ferric iron-binding periplasmic protein of ABC transporter | MSMEG_5433 4Fe-4S binding domain protein |
| MSMEG_4063 Amidohydrolase family protein | MSMEG_2159 Uncharacterized protein |
| MSMEG_2438 tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) | MSMEG_1678 LysR-family transcriptional regulator (Transcriptional regulator, LysR family protein) |
| MSMEG_1901 DNA-binding HTH domain containing protein, putative (Transcriptional regulator, LuxR family) | MSMEG_2157 Uncharacterized protein |
| MSMEG_1902 LysR-type transcriptional regulator (Transcriptional regulator) |
Bedaquiline.vs..DMSO.30min
Wild.type.rep2.y
Biological.replicate.3.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
X3dbfcy5plogcy3slide603norm
Wild.type.rep3
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
stphcy3plogcy5slide581norm
dcpA.knockout.rep2
Biological.replicate.2.of.6..isoniazid.treatment
WT.vs..DamtR.N.surplus_rep1
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
mc2155.vs.Dcrp1.replicate.3
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy3plogcy5slide903norm
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