Module 101 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.00000015 | 0.000034 | 79 | 24 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000015 | |
| Motif 2 |
 |
| e-value: 0.000034 |
| MSMEG_5264 Uncharacterized protein | MSMEG_0625 Uncharacterized protein |
| MSMEG_6707 Uncharacterized protein | MSMEG_0117 Alpha/beta hydrolase fold protein (EC 3.8.1.5) (Hydrolase) |
| MSMEG_3683 Uncharacterized protein | MSMEG_4477 Hydrolase, alpha/beta hydrolase fold family protein (Lignin peroxidase LipJ) |
| MSMEG_3077 Uncharacterized protein | MSMEG_3732 Uncharacterized protein |
| MSMEG_5269 Uncharacterized protein | MSMEG_5498 Uncharacterized protein |
| MSMEG_5307 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) | MSMEG_3022 Putative transglycosylase associated protein (Transglycosylase associated protein) |
| MSMEG_4406 UsfY protein | MSMEG_1717 ISMsm8, transposase |
| MSMEG_4295 Hydrolase, alpha/beta fold family protein | MSMEG_1460 Ferredoxin reductase component of dioxygenase (EC 1.18.1.3) (Pyridine nucleotide-disulphide oxidoreductase) |
| MSMEG_3501 Uncharacterized protein | MSMEG_1402 Uncharacterized protein |
| MSMEG_4736 Uncharacterized protein | MSMEG_6223 TetR family protein transcriptional repressor LfrR (Transcriptional regulator, TetR family) |
| MSMEG_0722 Uncharacterized protein | MSMEG_3502 Uncharacterized protein |
| MSMEG_5309 Transcriptional regulator (Uncharacterized protein) | MSMEG_0260 DNA-binding protein |
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..negative.control
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
M..smegmatis.Acid.NO.treated
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
X0.6..vs..50..air.saturation.Replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
stphcy5plogcy3slide580norm
Biological.replicate.3.of.6..kanamycin.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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