Module 114 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 3.1e-24 | 3.6e-16 | 82 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.1e-24 | |
| Motif 2 |
 |
| e-value: 3.6e-16 |
| MSMEG_3035 Elongation factor P (EF-P) | MSMEG_3984 Transposase IS111A/IS1328/IS1533 (Transposase IS116/IS110/IS902 family protein) |
| MSMEG_0479 Uncharacterized protein | MSMEG_1964 FAD-dependent oxygenase (Mitomycin radical oxidase) (EC 1.5.3.-) |
| MSMEG_4395 Excalibur domain family protein | MSMEG_3550 ABC amino acid transporter, ATPase component (EC 3.6.3.21) (Ectoine/hydroxyectoine ABC transporter, ATP-binding protein) |
| MSMEG_3036 N utilization substance protein B homolog (Protein NusB) | MSMEG_3258 Uncharacterized protein |
| MSMEG_0656 Transcriptional regulator, TetR family protein | MSMEG_5804 Uncharacterized protein |
| MSMEG_3547 Ectoine/hydroxyectoine ABC transporter solute-binding protein | MSMEG_5807 Methionine import ATP-binding protein MetN (EC 3.6.3.-) |
| MSMEG_1806 Uncharacterized protein | MSMEG_5806 Uncharacterized protein |
| MSMEG_2679 Uncharacterized protein | MSMEG_5810 Alkane monooxygenase (Putative monooxygenase) |
| MSMEG_3548 ABC amino acid transporter, permease component (Ectoine/hydroxyectoine ABC transporter, permease protein EhuC) | MSMEG_4844 Acyl-CoA dehydrogenase |
| MSMEG_2671 Dihydrofolate reductase (EC 1.5.1.3) | MSMEG_4845 Putative acyl-CoA dehydrogenase |
| MSMEG_3944 LuxR family two-component response regulator (Two component transcriptional regulatory protein devr) | MSMEG_5809 Lipoprotein YaeC, putative (NLPA lipoprotein) |
| MSMEG_3942 Uncharacterized protein | MSMEG_5808 Binding-protein-dependent transport systems inner membrane component |
| MSMEG_3943 Uncharacterized protein | MSMEG_3874 Transcriptional regulator, TetR family protein (Transcriptional regulatory repressor protein (TetR-family) EthR) |
| MSMEG_4394 LysR family protein transcriptional regulatory protein (LysR-family transcriptional regulator) | MSMEG_3549 ABC amino acid transporter, permease component (Ectoine/hydroxyectoine ABC transporter, permease protein EhuD) |
| MSMEG_0258 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_0125 Integral membrane protein (TctA subunit of the tripartite tricarboxylate transport(TTT) family) |
| MSMEG_3611 Probable phosphoketolase (EC 4.1.2.-) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Plogcy5plogcy3slide110norm
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
X3dbfcy5plogcy3slide601norm
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Wild.type.rep2.y
Biological.replicate.1.of.6..kanamycin.treatment
stphcy3plogcy5slide581norm
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
X2.5..vs..50..air.saturation.Replicate.4
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.7..panaxydol.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
X4dbfcy5plogcy3slide901norm
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_rep1
Wild.type.rep1.x
WT.vs..DamtR.N.surplus_.dyeswap_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
Biological.replicate.1.of.7..panaxydol.treatment
Wild.type.rep1.y
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Biological.replicate.3.of.6..kanamycin.treatment
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.4.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..falcarinol.treatment
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