Module 117 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 8.4e-19 | 0.0000029 | 79 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 8.4e-19 | |
| Motif 2 |
 |
| e-value: 0.0000029 |
| MSMEG_4405 Putative ECF sigma factor RpoE1 | MSMEG_4556 GTP-binding protein LepA |
| MSMEG_1996 N5,N10-methylenetetrahydromethanopterin reductase-related protein | MSMEG_4558 Uncharacterized protein |
| MSMEG_1995 Transcriptional regulator MdcY family protein | MSMEG_4048 Cyclase |
| MSMEG_3880 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein) | MSMEG_4049 Sugar transporter, permease protein |
| MSMEG_3886 Sec-independent protein translocase protein TatC | MSMEG_2100 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like protein (Peptidase family protein M20/M25/M40) (EC 3.4.-.-) |
| MSMEG_3885 DEAD/DEAH box helicase | MSMEG_0898 Ketose-bisphosphate aldolase (EC 4.1.2.13) (Tagatose-1,6-bisphosphate aldolase GatY) (EC 4.1.2.-) |
| MSMEG_3884 Uncharacterized protein | MSMEG_0897 Uncharacterized protein |
| MSMEG_1747 RNA polymerase sigma factor | MSMEG_3877 Precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
| MSMEG_1787 RsbW protein | MSMEG_3875 Precorrin-6x reductase (EC 1.3.1.54) |
| MSMEG_1784 Topoisomerase IB (EC 5.99.1.2) (Type I topoisomerase) | MSMEG_0248 Conserved transmembrane protein (Uncharacterized protein) |
| MSMEG_5264 Uncharacterized protein | MSMEG_2641 Enoyl-CoA hydratase |
| MSMEG_2927 ABC quaternary amine transporter, permease component (ABC transporter, permease protein OpuCB) | MSMEG_0245 Probable conserved transmembrane protein (Putative conserved transmembrane protein) |
| MSMEG_2926 Glycine betaine/L-proline ABC transporter (EC 3.6.3.32) (Glycine betaine/carnitine/choline transport ATP-binding protein opuCA) | MSMEG_0247 Secreted peptidase |
| MSMEG_2925 Binding-protein-dependent transport systems inner membrane component (Permease membrane component) | MSMEG_3878 Precorrin-6Y C5,15-methyltransferase (Decarboxylating) (EC 2.1.1.132) (Putative precorrin-6Y C5,15-methyltransferase CobL) (EC 2.1.1.132) |
| MSMEG_2924 Permease binding-protein component (Substrate-binding region of ABC-type glycine betaine transport system) | MSMEG_3879 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_2928 Uncharacterized protein |
Wild.type.rep2.x
KO_stationary.phase_rep1
Sub.MIC.INH
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
dosR.WT_Replicate3
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.5.of.6..kanamycin.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Biological.replicate.4.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
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