Module 121 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.000000000000014 | 0.000000013 | 76 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000000014 | |
| Motif 2 |
 |
| e-value: 0.000000013 |
| MSMEG_3618 Alanine and proline-rich secreted protein apa (Fibronectin-attachment family protein) | MSMEG_4800 3-oxoacyl-(Acyl-carrier-protein) reductase, putative (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_0467 Lysine exporter protein (LYSE/YGGA) (Membrane transport protein) | MSMEG_2734 tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase) |
| MSMEG_5917 Uncharacterized protein | MSMEG_3376 Beta-lactamase (Beta-lactamase-like protein) |
| MSMEG_5916 Uncharacterized protein | MSMEG_2732 Uncharacterized protein |
| MSMEG_2211 DNA-binding protein (Helix-turn-helix domain protein) | MSMEG_2733 Uncharacterized protein |
| MSMEG_4767 Major facilitator superfamily protein permease | MSMEG_2212 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_0020 Periplasmic binding protein | MSMEG_4802 Conserved domain protein (Uncharacterized protein) |
| MSMEG_4765 Transcriptional regulator, MerR family protein | MSMEG_4798 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) |
| MSMEG_4799 Aldehyde dehydrogenase (NAD) family protein (EC 1.2.1.-) | MSMEG_0022 L-ornithine 5-monooxygenase (Putative L-ornithine 5-/L-lysine 6-monooxygenase) (EC 1.14.13.59) |
| MSMEG_0469 GCN5-related N-acetyltransferase (Transcriptional regulatory protein PadR) | MSMEG_4801 Carveol dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.275) |
| MSMEG_0021 Aspartate 1-decarboxylase (EC 4.1.1.11) (Aspartate alpha-decarboxylase) [Cleaved into: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain] |
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.4.of.7..ethambutol.treatment
X2XR.rep1
Biological.replicate.4.of.6..negative.control
Wild.type.rep1.x
dosR.WT_Replicate1
DglnR_without.vs..with.N_rep1
X3dbfcy5plogcy3slide601norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.5.of.6..negative.control
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
Biological.replicate.1.of.7..ethambutol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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