Module 128 Residual: 0.60
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.60 | 1.1e-25 | 4.2e-16 | 79 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.1e-25 | |
| Motif 2 |
 |
| e-value: 4.2e-16 |
| MSMEG_6154 Adenylate cyclase, family protein 3 (Adenylate/guanylate cyclase) (EC 4.6.1.1) | MSMEG_3631 Integral membrane protein (Peptidase M48 Ste24p) |
| MSMEG_6153 DNA polymerase III subunit delta (EC 2.7.7.7) | MSMEG_3632 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
| MSMEG_0949 HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490 | MSMEG_3634 IMP dehydrogenase family protein (Inosine-5-monophosphate dehydrogenase guaB1) (EC 1.1.1.-) |
| MSMEG_6422 Ferritin BfrB (EC 1.16.3.1) (Non-heme ferritin Ftn) | MSMEG_0951 Glutaredoxin 2 |
| MSMEG_6507 Glycogen operon protein GlgX homolog (EC 3.2.1.-) | MSMEG_2304 |
| MSMEG_3440 L-serine ammonia-lyase (EC 4.3.1.17) | MSMEG_2303 |
| MSMEG_4739 Uncharacterized protein | MSMEG_6416 Phosphoglycerate mutase (EC 5.4.2.-) (Phosphoglycerate mutase family protein) |
| MSMEG_3564 Ferroxidase (EC 1.16.3.1) | MSMEG_2301 |
| MSMEG_6420 Abortive infection protein | MSMEG_5273 Acetyl-CoA acetyltransferase (EC 2.3.1.-) (Beta-ketoadipyl CoA thiolase) |
| MSMEG_6421 Transcriptional regulator | MSMEG_6419 Uncharacterized protein |
| MSMEG_1021 Glyoxalase/bleomycin resistance protein/dioxygenase | MSMEG_6418 Prephenate dehydratase (PDT) (EC 4.2.1.51) |
| MSMEG_1512 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | MSMEG_3438 Uncharacterized protein |
| MSMEG_1510 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase) (dTDP-L-rhamnose synthase) | MSMEG_5421 Uncharacterized protein |
| MSMEG_6259 Ammonium transporter | MSMEG_0007 Putative conserved membrane protein (Uncharacterized protein) |
| MSMEG_3630 Transcriptional repressor, CopY family protein | MSMEG_3629 Uncharacterized protein |
mc2155.vs.Dcrp1.replicate.1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep1.x
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
rel.knockout.rep2
X4XR.rep1
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep2.x
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
Biological.replicate.4.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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