Module 129 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 1.1e-20 | 0.0000000059 | 81 | 24 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.1e-20 | |
| Motif 2 |
 |
| e-value: 0.0000000059 |
| MSMEG_3195 Uncharacterized protein | MSMEG_2293 |
| MSMEG_5306 Transcriptional regulatory protein | MSMEG_0271 Uncharacterized protein |
| MSMEG_5304 Two-component sensor kinase | MSMEG_0273 Ethanolamine utilization protein EutN (Ethanolamine utilization protein EutN/carboxysome structural protein CcmL) |
| MSMEG_6076 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) | MSMEG_0272 Microcompartments protein (Propanediol utilization protein PduA) |
| MSMEG_4399 Uncharacterized protein | MSMEG_0275 Bacterial microcompartments protein family protein (Microcompartments protein) |
| MSMEG_5698 Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A) | MSMEG_0274 Uncharacterized protein |
| MSMEG_5699 ThiS family protein | MSMEG_5725 PLP-dependent aminotransferases (Succinyldiaminopimelate aminotransferase) (EC 2.6.1.11) |
| MSMEG_1687 Uncharacterized protein | MSMEG_1832 Uncharacterized protein |
| MSMEG_6073 Uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 (EC 2.1.1.-) | MSMEG_1833 Uncharacterized protein |
| MSMEG_6075 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) | MSMEG_1013 Uncharacterized protein |
| MSMEG_6074 Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS) | MSMEG_5066 Integral membrane protein |
| MSMEG_3196 Uncharacterized protein | MSMEG_5065 Mg/Co/Ni transporter MgtE (Mg/Co/Ni transporter MgtE (Contains CBS domain) (Mg/Co/Ni transporter MgtE (Contains CBS domain) intracellular)) |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
Biological.replicate.3.of.7..ethambutol.treatment
Wild.type.rep2.x
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate2
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_rep1
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
DamtR.with.vs..DamtR.without.N_.rep2
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
X3dbfcy3plogcy5slide607norm
Bedaquiline.vs..DMSO.15min
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
Sub.MIC.INH
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Biological.replicate.1.of.7..panaxydol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
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