Module 134 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 4.6e-20 | 0.0024 | 77 | 35 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4.6e-20 | |
| Motif 2 |
 |
| e-value: 0.0024 |
| MSMEG_5090 Uncharacterized protein | MSMEG_2922 Uncharacterized protein |
| MSMEG_4626 Ribonuclease E (RNase E) (EC 3.1.26.12) | MSMEG_3821 Amino acid permease |
| MSMEG_2571 Cupin 2, conserved barrel (Uncharacterized protein) | MSMEG_0116 ABC transporter related protein (Taurine import ATP-binding protein TauB) (EC 3.6.3.36) |
| MSMEG_6110 Hypoxanthine phosphoribosyltransferase (EC 2.4.2.8) | MSMEG_2658 Beta-lactamase (EC 3.5.2.6) |
| MSMEG_6390 Transporter, major facilitator family protein | MSMEG_0113 Taurine transport system permease protein TauC |
| MSMEG_0473 Transcriptional regulator, LuxR family protein | MSMEG_0114 Extracellular solute-binding protein, family protein 3 (Substrate-binding region of ABC-type glycine betaine transport system) |
| MSMEG_3395 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_5334 Oxidoreductase, molybdopterin binding protein (Uncharacterized protein) |
| MSMEG_5290 Uncharacterized protein | MSMEG_3437 Putative esterase (Putative esterase family protein) |
| MSMEG_2419 Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18) | MSMEG_4415 Transaldolase (EC 2.2.1.2) |
| MSMEG_2418 Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III) | MSMEG_3513 Enhanced intracellular survival protein (Enhanced intracellular survival protein Eis) |
| MSMEG_2417 Uncharacterized protein | MSMEG_2784 Methionine-R-sulfoxide reductase (EC 1.8.4.-) (EC 1.8.4.11) |
| MSMEG_0153 2-dehydropantoate 2-reductase (EC 1.1.1.169) | MSMEG_0111 Putative magnesium transport protein |
| MSMEG_0154 Pyruvate kinase (EC 2.7.1.40) | MSMEG_4218 Possible conserved transmembrane protein (Putative conserved transmembrane protein) |
| MSMEG_2655 LppU protein | MSMEG_3818 Glutaminase (EC 3.5.1.2) |
| MSMEG_4770 Twin-arginine translocation pathway signal (Uncharacterized protein) | MSMEG_0125 Integral membrane protein (TctA subunit of the tripartite tricarboxylate transport(TTT) family) |
| MSMEG_2657 Peptidase, M16 family protein | MSMEG_5163 ABC proline/glycine betaine family protein transporter, periplasmic ligand binding protein (Putative ABC-type proline/glycine betaine transport protein) |
| MSMEG_2656 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) | MSMEG_5288 Putative serine/threonine protein kinase |
| MSMEG_2923 Dehydrogenase/reductase SDR family protein member 1 (EC 1.1.-.-) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.4.of.7..falcarinol.treatment
WT_stationary.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.2.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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