Module 149 Residual: 0.45
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.45 | 0.00000043 | 85 | 75 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000043 | |
| Motif 2 |
 |
| e-value: 85 |
| MSMEG_1599 Alternative RNA polymerase sigma-D factor, SigD (RNA polymerase sigma-70 factor) | MSMEG_0697 Integral membrane protein |
| MSMEG_0909 Acyl-ACP thioesterase superfamily protein | MSMEG_0696 Alanine-rich protein (Uncharacterized protein) |
| MSMEG_1600 Uncharacterized protein | MSMEG_3321 ATP/GTP-binding protein |
| MSMEG_1647 Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] | MSMEG_6269 Magnesium transporter MgtE |
| MSMEG_1645 NADH:flavin oxidoreductase/NADH oxidase (EC 1.5.1.30) (NADH:flavin oxidoreductase/nadh oxidase) | MSMEG_5196 Beta-Ig-H3/fasciclin (Fasciclin domain protein) |
| MSMEG_1762 Piperideine-6-carboxylic acid dehydrogenase (Piperideine-6-carboxylic acid dehydrogenase Pcd) (EC 1.2.1.3) | MSMEG_5273 Acetyl-CoA acetyltransferase (EC 2.3.1.-) (Beta-ketoadipyl CoA thiolase) |
| MSMEG_1763 Leucine-responsive regulatory protein | MSMEG_5274 Phosphoribosylglycinamide formyltransferase 2 (GART 2) (EC 2.1.2.-) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (GAR transformylase 2) |
| MSMEG_6071 Conserved hypothetical Zn-dependent hydrolase (Metallo-beta-lactamase superfamily protein) | MSMEG_3896 Prokaryotic ubiquitin-like protein Pup (Bacterial ubiquitin-like modifier) |
| MSMEG_2169 Acetyl-CoA carboxylase, carboxyl transferase, beta subunit (EC 6.4.1.2) | MSMEG_2111 Secreted chorismate mutase (CM) (EC 5.4.99.5) |
| MSMEG_2776 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) | MSMEG_2249 Uncharacterized protein |
| MSMEG_0012 ABC-type transporter, permease components (Ferric enterobactin transport system permease protein FepD) | MSMEG_3485 RNA polymerase sigma factor |
| MSMEG_5479 Type I antifreeze protein | MSMEG_0009 Uncharacterized protein |
| MSMEG_0698 Isoniazid inducible protein IniC (Isoniazid inductible protein IniC) | MSMEG_1214 Oxidoreductase |
| MSMEG_5214 RNA polymerase sigma factor | MSMEG_1212 Uncharacterized protein |
Biological.replicate.1.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
X4XR.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.7..falcarinol.treatment
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Wild.type.rep2.y
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep2
Wild.type.rep2.x
Biological.replicate.1.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate2
dosR.WT_Replicate2
Biological.replicate.6.of.7..panaxydol.treatment
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