Module 160 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.000000077 | 0.000067 | 84 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000077 | |
| Motif 2 |
 |
| e-value: 0.000067 |
| MSMEG_0359 Alpha-(1->3)-arabinofuranosyltransferase (EC 2.4.2.47) (Arabinofuranan 3-O-arabinosyltransferase) | MSMEG_5786 Thiredoxin |
| MSMEG_5592 Uncharacterized protein | MSMEG_5784 Transcriptional regulatory protein |
| MSMEG_5590 Putative glutamate--cysteine ligase 2-3 (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase 2-3) (GCS 2-3) (Gamma-GCS 2-3) | MSMEG_5785 Probable exported protein (Putative conserved exported protein) |
| MSMEG_1153 FAD dependent oxidoreductase | MSMEG_0226 Conserved transmembrane proteinm, MmpS5 (MmpS5 protein) |
| MSMEG_1152 Citrate-proton symporter | MSMEG_0227 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_2804 Two-component system sensor kinase | MSMEG_0225 MmpL4 protein (Transmembrane transport protein MmpL1) |
| MSMEG_2806 Two-component system response regulator | MSMEG_1157 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_0361 Glycosyl hydrolase family protein 3 (Uncharacterized protein) | MSMEG_1156 Dihydrodipicolinate synthetase (EC 4.3.3.7) |
| MSMEG_0360 Small secreted protein (Uncharacterized protein) | MSMEG_1155 Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_0460 Alpha/beta hydrolase fold | MSMEG_1154 Formyl-coenzyme A transferase (EC 2.8.3.16) (L-carnitine dehydratase/bile acid-inducible protein F) |
| MSMEG_0461 CinZ protein | MSMEG_1158 5-oxovalerate dehydrogenase (Aldehyde dehydrogenase) (EC 1.2.1.-) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Wild.type.rep2.y
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.4.of.6..kanamycin.treatment
KO_log.phase_rep1
Wild.type.rep3
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.7.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep1
Slow.vs..Fast.Replicate.4
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
dosR.WT_Replicate2
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
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