Module 164 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.50 | 3.8e-18 | 0.000000056 | 78 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.8e-18 | |
| Motif 2 |
 |
| e-value: 0.000000056 |
| MSMEG_5464 Integral membrane transport protein (Major facilitator superfamily MFS_1) | MSMEG_2452 Uncharacterized protein |
| MSMEG_5463 6-phosphogluconate dehydrogenase NAD-binding protein (EC 1.1.1.31) (6-phosphogluconate dehydrogenase, NAD-binding) | MSMEG_5667 Oxidoreductase (Phytoene dehydrogenase) |
| MSMEG_4379 Isochorismatase hydrolase | MSMEG_5666 Uncharacterized protein |
| MSMEG_0437 Conserved hypothetical integral membrane protein | MSMEG_3021 AAA ATPase, central region (Conserved hypothetical alanine leucine valine rich protein) (EC 2.7.7.7) |
| MSMEG_2496 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (NAD-binding protein) | MSMEG_3572 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_2495 Decarboxylase | MSMEG_3571 Thioesterase family protein |
| MSMEG_0434 Aminoglycoside 2'-N-acetyltransferase (EC 2.3.1.-) (AAC(2')-Id) | MSMEG_4046 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) |
| MSMEG_3038 Uncharacterized protein | MSMEG_3385 Uncharacterized protein |
| MSMEG_4052 Uncharacterized protein | MSMEG_4045 Muconolactone Delta-isomerase (MIase) (EC 5.3.3.4) |
| MSMEG_0554 ABC transporter permease protein, putative (Binding-protein-dependent transport systems inner membrane component) | MSMEG_2497 Amidase (EC 3.5.1.4) (Amidase family protein) |
| MSMEG_0555 ABC transporter permease protein (Binding-protein-dependent transport systems inner membrane component) | MSMEG_0460 Alpha/beta hydrolase fold |
| MSMEG_0556 ABC transporter related protein (ABC transporter, nucleotide binding/ATPase protein) | MSMEG_0461 CinZ protein |
| MSMEG_0553 Probable sugar ABC transporter, substrate-binding protein, putative | MSMEG_0672 Uncharacterized protein |
| MSMEG_1100 DGPFAETKE family protein (Dgpf protein) | MSMEG_5373 Nitrilase 2 (EC 3.5.5.1) |
| MSMEG_1101 Uncharacterized protein | MSMEG_6581 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_4047 Dihydropteroate synthase |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.5.of.7..panaxydol.treatment
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Wild.type.rep1.x
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
X3dbfcy5plogcy3slide601norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.5.of.6..kanamycin.treatment
dcpA.knockout.rep2
Biological.replicate.2.of.6..isoniazid.treatment
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
WT_stationary.phase_rep1
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.3.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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