Module 172 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.000000000056 | 0.00000071 | 80 | 23 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000056 | |
| Motif 2 |
 |
| e-value: 0.00000071 |
| MSMEG_4641 Monooxygenase FAD-binding protein (Salicylate hydroxylase) | MSMEG_5664 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) |
| MSMEG_0804 Uncharacterized protein | MSMEG_4637 Uncharacterized protein |
| MSMEG_0805 Uncharacterized protein | MSMEG_5457 Shikimate 5-dehydrogenase (Shikimate/quinate 5-dehydrogenase) (EC 1.1.1.25) |
| MSMEG_4053 Transcriptional regulatory protein | MSMEG_4127 TnpC protein |
| MSMEG_4055 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) | MSMEG_4741 MmpL protein |
| MSMEG_4054 Uncharacterized protein | MSMEG_4740 Glycosyltransferase family protein 28 (UDP-glycosyltransferase) |
| MSMEG_4150 4-hydroxy-2-oxovalerate aldolase 1 (HOA 1) (EC 4.1.3.39) (4-hydroxy-2-keto-pentanoic acid aldolase 1) (4-hydroxy-2-oxopentanoate aldolase 1) | MSMEG_4149 Acetaldehyde dehydrogenase 1 (EC 1.2.1.10) (Acetaldehyde dehydrogenase [acetylating] 1) |
| MSMEG_0497 Glycerol dehydratase large subunit (Propanediol dehydratase medium subunit) (EC 4.2.1.30) | MSMEG_4148 Lipase |
| MSMEG_0496 Coenzyme B12-dependent glycerol dehydrogenase small subunit (Propanediol dehydratase small subunit) (EC 4.2.1.30) | MSMEG_5458 Acetyltransferase Pat (EC 2.3.1.-) (GCN5-related N-acetyltransferase) (GNAT) (Protein acetyltransferase) (Pat) |
| MSMEG_1165 UPF0234 protein MSMEG_1165/MSMEI_1134 | MSMEG_4193 Phosphoglycerate mutase (EC 5.4.2.-) (Phosphoglycerate mutase family protein) |
| MSMEG_4639 Uncharacterized protein | MSMEG_4194 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) |
| MSMEG_4638 Phthalate 4,5-dioxygenase (EC 1.14.12.7) (Vanillate O-demethylase oxidoreductase) (EC 1.14.13.-) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
X4XR.rep1
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide113norm
dosR.WT_Replicate2
dosR.WT_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
KO_log.phase_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.6.of.6..negative.control
stphcy5plogcy3slide487norm
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Biological.replicate.4.of.6..kanamycin.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
stphcy3plogcy5slide581norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
Wild.type.rep3
Wild.type.rep2.x
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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