Module 176 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.50 | 0.00017 | 0.000011 | 85 | 18 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00017 | |
| Motif 2 |
 |
| e-value: 0.000011 |
| MSMEG_0974 Cytochrome c-type biogenesis protein CcsB | MSMEG_0635 Putative conserved exported protein |
| MSMEG_0971 Thiol-disulfide isomerase/thioredoxin (Uncharacterized protein) | MSMEG_6195 Anion-transporting ATPase (EC 3.6.3.16) (Ion-transporting ATPase) |
| MSMEG_0969 Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) | MSMEG_0970 Phosphoglycerate mutase (EC 5.4.2.-) (Phosphoglycerate mutase family protein) |
| MSMEG_0972 Cytochrome C biogenesis protein transmembrane region (Cytochrome C-type biogenesis protein ccdA) | MSMEG_4263 Ubiquinol-cytochrome C reductase QcrB (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase cytochrome b subunit) |
| MSMEG_0973 Conserved membrane protein | MSMEG_4261 Ubiquinol-cytochrome c reductase cytochrome c subunit |
| MSMEG_6192 Uncharacterized protein | MSMEG_4262 Ubiquinol-cytochrome c reductase iron-sulfur subunit |
| MSMEG_6193 Anion-transporting ATPase (EC 3.6.3.16) | MSMEG_6190 Metallo-beta-lactamase family protein (Putative hydrolase (Beta-lactamase-like)) |
| MSMEG_0633 PAP2 superfamily protein (Phosphoesterase PA-phosphatase related protein) | MSMEG_4260 Cytochrome c oxidase subunit 3 (EC 1.9.3.1) |
| MSMEG_6191 Putative endoribonuclease L-PSP family (Translation initiation inhibitor) | MSMEG_4258 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.3.of.6..kanamycin.treatment
Sub.MIC.INH
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
dosR.WT_Replicate3
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.2.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.5.of.6..isoniazid.treatment
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.1.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
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