Module 177 Residual: 0.58
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.58 | 1.4e-31 | 0.004 | 82 | 25 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.4e-31 | |
| Motif 2 |
 |
| e-value: 0.004 |
| MSMEG_3131 AMP-binding protein | MSMEG_1423 Coenzyme pqq synthesis protein E pqqE (Radical SAM domain protein) |
| MSMEG_5402 Dehydrogenase DhgA (Short-chain dehydrogenase/reductase SDR) | MSMEG_1422 Uncharacterized protein |
| MSMEG_5404 AMP-dependent synthetase and ligase (EC 6.2.1.17) (Propionate--CoA ligase) | MSMEG_1421 Uncharacterized protein |
| MSMEG_5911 AraC family protein transcriptional regulator | MSMEG_5908 Acyl-CoA synthase (Putative fatty-acid-CoA synthetase fadD17) |
| MSMEG_5915 Enoyl-CoA hydratase (EC 4.2.1.17) | MSMEG_5909 NAD-dependent epimerase/dehydratase (EC 5.1.3.2) (Oxidoreductase) |
| MSMEG_3985 Integral membrane transport protein (Putative alpha-ketoglutarate permease) | MSMEG_5904 Conserved domain protein (Ferredoxin FdxD) |
| MSMEG_0172 Probable conserved transmembrane protein, putative | MSMEG_5906 Acyl-CoA dehydrogenase FadE26 (EC 1.3.8.-) (Putative acyl-CoA dehydrogenase) |
| MSMEG_0052 Uncharacterized protein | MSMEG_5907 Acyl-CoA dehydrogenase (Acyl-CoA dehydrogenase FadE27) (EC 1.3.8.-) |
| MSMEG_5234 Short-chain dehydrogenase/reductase SDR | MSMEG_6477 Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) |
| MSMEG_5235 Short chain dehydrogenase family protein (Short-chain dehydrogenase/reductase SDR) | MSMEG_6476 Uncharacterized protein |
| MSMEG_5232 Uncharacterized protein | MSMEG_2761 Putative secreted alanine rich protein (Uncharacterized protein) |
| MSMEG_5233 NAD-dependent epimerase/dehydratase (EC 5.1.3.2) (RmlD substrate binding domain superfamily protein) | MSMEG_2763 Uncharacterized protein |
| MSMEG_1424 FMN-dependent dehydrogenase |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
X4XR.rep1
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.3.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Wild.type.rep2.y
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.5
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
Biological.replicate.3.of.6..kanamycin.treatment
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
dosR.WT_Replicate3
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_rep1
Bedaquiline.vs..DMSO..45min
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
dosR.WT_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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