Module 209 Residual: 0.53Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.53	5.7e-22	0.0000015	76	34	20160204

Motifs

Motif 1
	e-value: 5.7e-22
Motif 2
	e-value: 0.0000015

Module Plots

Members

MSMEG_2837 Nitrate reductase NarB (Putative oxidoreductase (Nitrate reductase narb)) (EC 1.7.99.4)	MSMEG_2096 Integral membrane protein
MSMEG_4540 Acetyltransferase, gnat family protein (GCN5-related N-acetyltransferase)	MSMEG_3897 Pup deamidase/depupylase (EC 3.4.-.-) (EC 3.5.1.-) (Deamidase of protein Pup)
MSMEG_6676 Probable conserved transmembrane protein	MSMEG_3692 Galactokinase (EC 2.7.1.6)
MSMEG_6675 Uncharacterized protein	MSMEG_3691 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)
MSMEG_6674 Transcriptional regulator, LysR family (Transcriptional regulator, LysR family protein)	MSMEG_0543 Conserved hypothetical membrane protein (Uncharacterized protein)
MSMEG_3029 Peptidase A24A, prepilin type IV (Peptidase, A24 (Type IV prepilin peptidase) family protein)	MSMEG_4539 Alkanesulfonate monooxygenase (EC 1.14.14.5) (Alkanesulfonate monooxygenase 2)
MSMEG_3457 DoxD family protein/pyridine nucleotide-disulfide oxidoreductase	MSMEG_0717 Aldose 1-epimerase (Aldose 1-epimerase subfamily protein)
MSMEG_4524 Anthranilate synthase component I (Isochorismate synthase/isochorismate-pyruvate lyase mbtI)	MSMEG_1752 Uncharacterized protein
MSMEG_5366 Uncharacterized protein	MSMEG_2400 50S ribosomal protein L28
MSMEG_2512 L-lactate 2-monooxygenase (Lactate 2-monooxygenase) (EC 1.13.12.4)	MSMEG_2402 Dak phosphatase (Dihydroxyacetone kinase)
MSMEG_0707 Dimethylmenaquinone methyltransferase (Uncharacterized protein)	MSMEG_2737 PE-PPE, C-terminal domain protein (Ppe family protein)
MSMEG_0706 4-carboxy-4-hydroxy-2-oxoadipate aldolase (4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase) (EC 4.1.-.-)	MSMEG_2031 Uncharacterized protein
MSMEG_3908 Uncharacterized protein	MSMEG_2986 Amidohydrolase, AtzE family protein (EC 3.-.-.-)
MSMEG_3616 Integral membrane protein (Transglycosylase-associated protein)	MSMEG_3609 Hydride transferase 1
MSMEG_4162 Uncharacterized protein	MSMEG_5001 Pesticide degrading monooxygenase
MSMEG_3615 Zinc-binding alcohol dehydrogenase family protein (EC 1.-.-.-)	MSMEG_2428 DNA-binding protein
MSMEG_3907 RecB family protein exonuclease	MSMEG_2429 Aldo/keto reductase (EC 1.1.1.65)

Conditions

WT.vs..DamtR.without.N_rep1

KO_log.phase_rep1

M..smegmatis.Acid.NO.treated

Mycobacterium.smegmatis.Spheroplast.induced

Biological.replicate.3.of.7..falcarinol.treatment

Biological.replicate.1.of.6..negative.control

MB100pruR.vs..MB100..rep.3

dosR.WT_Replicate1

Biological.replicate.2.of.6..kanamycin.treatment

Wild.type.rep2.y

Plogcy5plogcy3slide110norm

Wild.type.rep1.x

Wild.type.rep1.y

MB100pruR.vs..MB100.rep.4

Biological.replicate.3.of.7..panaxydol.treatment

MB100pruR.vs..MB100.rep.2

WT.vs..DamtR.without.N_.dyeswap_rep2

Biological.replicate.7.of.7..ethambutol.treatment

Biological.replicate.1.of.7..ethambutol.treatment

rel.knockout.rep2

rel.knockout.rep1

Bedaquiline.vs..DMSO..45min

Biological.replicate.6.of.6..negative.control

Biological.replicate.6.of.7..panaxydol.treatment

WT.vs..DglnR.N_starvation_dye.swap_rep2

Biological.replicate.3.of.6..isoniazid.treatment

WT_log.phase_rep2

X0.6..vs..50..air.saturation.Replicate.2

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

Biological.replicate.6.of.7..ethambutol.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2

mc2155.vs.Dcrp1.replicate.2

mc2155.vs.Dcrp1.replicate.4

Biological.replicate.3.of.6..negative.control

Biological.replicate.5.of.7..panaxydol.treatment

dcpA.knockout.rep1

Biological.replicate.2.of.7..falcarinol.treatment

Plogcy5plogcy3slide111norm

stphcy5plogcy3slide580norm

X3dbfcy5plogcy3slide601norm

X2.5..vs..50..air.saturation.Replicate.5

DglnR_without.vs..with.N_rep1

X2.5..vs..50..air.saturation.Replicate.1

X2.5..vs..50..air.saturation.Replicate.2

X2.5..vs..50..air.saturation.Replicate.3

WT_stationary.phase_rep2

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.6.of.6..isoniazid.treatment

X4XR.rep1

Tet.CarD.vs.Control..Replicates.1..2..and.3.

Slow.vs..Fast.Replicate.5

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.5.of.6..isoniazid.treatment

WT.vs..DamtR.N.surplus_dyeswap_rep2

Slow.vs..Fast.Replicate.2

Biological.replicate.7.of.7..panaxydol.treatment

BatchCulture_LBTbroth_ExponentialPhase_Replicate2

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

Wild.type.rep3

WT.vs..DamtR.N.surplus_.dyeswap_rep1

WT.with.vs..without.N_rep2

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.with.vs..without.N_rep1

DglnR_without.vs..with.N_dyeswap_rep2

X2XR.rep1

X2XR.rep2

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.4.of.6..kanamycin.treatment

BatchCulture_LBTbroth_StationaryPhase_Replicate1

Biological.replicate.2.of.6..negative.control

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

X4dbfcy3plogcy5slide903norm

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