Module 243 Residual: 0.46
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.46 | 0.0000000000000023 | 0.00017 | 84 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000023 | |
| Motif 2 |
 |
| e-value: 0.00017 |
| MSMEG_2260 Putative transcriptional regulator | MSMEG_5662 DNA-binding response regulator PrrA (Two component transcriptional regulator, winged helix family) |
| MSMEG_2261 Uncharacterized protein | MSMEG_6666 Uncharacterized protein |
| MSMEG_1757 ATP-dependent DNA helicase (DEAD/DEAH box helicase) | MSMEG_1638 Roadblock/LC7 domain protein (Roadblock/LC7 family protein) |
| MSMEG_1756 DNA glycosylase/endonuclease (EC 4.2.99.18) (Endonuclease VIII and dna n-glycosylase with an ap lyase activity) | MSMEG_1639 Uncharacterized protein |
| MSMEG_1759 Uncharacterized protein | MSMEG_1637 Histidine kinase (EC 2.7.13.3) |
| MSMEG_5659 ABC transporter, ATP-binding protein | MSMEG_2341 Uncharacterized protein |
| MSMEG_1170 Conserved domain protein | MSMEG_1640 ATP/GTP binding protein (ATP/GTP-binding protein) |
| MSMEG_5661 ABC transporter ATP-binding protein (Putative multidrug ABC transporter, fused permease and ATP-binding protein) | MSMEG_5116 Uncharacterized protein |
| MSMEG_5660 ABC transporter (ABC transporter ATP-binding protein) | MSMEG_5114 Acyl-CoA synthase (Fatty-acid-CoA ligase FadD36) |
| MSMEG_5663 Sensor-type histidine kinase PrrB (EC 2.7.13.3) (Sensor-type histidine kinase prrB) |
KO_stationary.phase_rep1
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Plogcy5plogcy3slide113norm
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.4.of.6..negative.control
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
X4dbfcy3plogcy5slide903norm
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
X2XR.rep2
Biological.replicate.5.of.6..isoniazid.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.6.of.7..falcarinol.treatment
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