Module 277 Residual: 0.60
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.60 | 0.00015 | 0.014 | 79 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00015 | |
| Motif 2 |
 |
| e-value: 0.014 |
| MSMEG_6449 Uncharacterized protein | MSMEG_3638 CBS domain protein (Conserved hypothetical membrane protein) |
| MSMEG_3640 Malate synthase G (EC 2.3.3.9) | MSMEG_3639 Uncharacterized protein |
| MSMEG_1607 4-oxalocrotonate tautomerase (Putative tautomerase) | MSMEG_5397 ATP-dependent DNA helicase RecQ (EC 3.6.1.-) |
| MSMEG_5610 Putative transcriptional regulator family protein (Transcriptional regulator, HxlR family) | MSMEG_5609 Carotenoid oxygenase |
| MSMEG_5342 Uncharacterized protein | MSMEG_5608 Acetyl-CoA acetyltransferase (Putative lipid carrier protein or keto acyl-coa thiolase) (EC 2.3.1.-) |
| MSMEG_6399 Antigen 85-C (EC 2.3.1.-) (Secreted antigen 85-A FbpA) | MSMEG_6740 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7) |
| MSMEG_0311 Glycosyltransferase | MSMEG_6450 Uncharacterized protein |
| MSMEG_6236 Response regulator, two-component system (Two-component system, regulatory protein) | MSMEG_4709 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_5972 Uncharacterized protein | MSMEG_4086 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) |
| MSMEG_0880 60 kDa chaperonin 1 (GroEL protein 1) (Protein Cpn60 1) | MSMEG_1654 Isocitrate dehydrogenase (NADP) Icd2 (Isocitrate dehydrogenase, NADP-dependent) (EC 1.1.1.42) |
| MSMEG_6238 Putative two-component system sensor kinase | MSMEG_4708 Putative methyltransferase (EC 2.1.1.-) (SAM-dependent methyltransferase) |
| MSMEG_3967 TonB-dependent receptor | MSMEG_0024 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) |
| MSMEG_0173 Uncharacterized protein | MSMEG_1170 Conserved domain protein |
| MSMEG_3637 CBS domain protein | MSMEG_0023 Cell wall synthesis protein CwsA (Cell wall synthesis and cell shape protein A) |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.4.of.6..negative.control
Biological.replicate.3.of.7..ethambutol.treatment
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
X2XR.rep1
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy5plogcy3slide603norm
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.1.of.7..falcarinol.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
dosR.WT_Replicate3
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep2.x
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..panaxydol.treatment
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
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