Module 300 Residual: 0.59
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.59 | 0.000000023 | 0.00049 | 89 | 24 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000023 | |
| Motif 2 |
 |
| e-value: 0.00049 |
| MSMEG_3645 Uncharacterized protein | MSMEG_2686 Conserved transmembrane protein (Uncharacterized protein) |
| MSMEG_0868 Uncharacterized protein | MSMEG_2687 Carveol dehydrogenase (EC 1.1.1.275) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_0869 Uncharacterized protein | MSMEG_0710 Protein GrpE (HSP-70 cofactor) |
| MSMEG_6869 Regulatory protein | MSMEG_0711 Chaperone protein DnaJ |
| MSMEG_4428 Uncharacterized protein | MSMEG_6062 ABC transporter, ATP-binding protein (EC 3.6.3.-) (Fe uptake system permease) |
| MSMEG_4954 Transcription termination factor Rho | MSMEG_6063 Fe uptake system integral membrane protein (Transport system permease) |
| MSMEG_0709 Chaperone protein DnaK (HSP70) (Heat shock 70 kDa protein) (Heat shock protein 70) | MSMEG_2688 Antibiotic biosynthesis monooxygenase (Antibiotic biosynthesis monooxygenase domain protein) |
| MSMEG_3865 Uncharacterized protein | MSMEG_6064 Lipoprotein (Putative iron chelate uptake ABC transporter, solute-binding protein) |
| MSMEG_3864 Cobaltochelatase, CobN subunit (EC 6.6.1.2) | MSMEG_2937 Pyridoxal 5'-phosphate synthase subunit PdxS (PLP synthase subunit PdxS) (EC 4.3.3.6) (Pdx1) |
| MSMEG_5015 Secreted protein | MSMEG_2938 Acyl-CoA thioesterase II (EC 3.1.2.-) (Acyl-CoA thioesterase II tesB2) (EC 3.1.2.2) |
| MSMEG_0015 Ferric enterobactin ABC transporter, ATP-binding protein FepC (Ferric enterobactin transport ATP-binding protein FepC) | MSMEG_2939 Pyridoxal 5'-phosphate synthase subunit PdxT (EC 4.3.3.6) (Pdx2) (Pyridoxal 5'-phosphate synthase glutaminase subunit) (EC 3.5.1.2) |
| MSMEG_0713 Putative heat shock protein transcriptional regulator Hspr (Merr family) (Transcriptional regulator, MerR family protein) | MSMEG_0266 Arginine decarboxylase (EC 4.1.1.19) (Orn/Lys/Arg decarboxylase, major region) (EC 4.1.1.19) |
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
MB100pruR.vs..MB100.rep.4
Biological.replicate.7.of.7..falcarinol.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..falcarinol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.without.N_rep1
dosR.WT_Replicate4
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.3.of.6..negative.control
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X4dbfcy3plogcy5slide903norm
Mycobacterium.smegmatis.Spheroplast.induced
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_rep1
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep1.x
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.4.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
dcpA.knockout.rep2
Plogcy5plogcy3slide111norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X4XR.rep2
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
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