Module 317 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 9.2e-27 | 1.9e-27 | 79 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 9.2e-27 | |
| Motif 2 |
 |
| e-value: 1.9e-27 |
| MSMEG_1864 Integrase catalytic region (Transposase) | MSMEG_5746 Gas vesicle protein |
| MSMEG_2893 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region (EC 1.-.-.-) (Oxidoreductase, NAD/FAD-binding) | MSMEG_5744 Gas vesicle K (Gas vesicle protein K) |
| MSMEG_2892 Pigment production hydroxylase (EC 1.-.-.-) | MSMEG_5745 Gas vesicle synthesis protein (Uncharacterized protein) |
| MSMEG_2894 Cyclohexanone monooxygenase (EC 1.14.13.22) (Steroid monooxygenase) | MSMEG_5741 Uncharacterized protein |
| MSMEG_6078 LpqE protein (Uncharacterized protein) | MSMEG_4411 Oxidoreductase FAD-binding region |
| MSMEG_2824 | MSMEG_4412 Molybdopterin binding oxidoreductase (EC 1.7.-.-) (Oxidoreductase, molybdopterin binding) |
| MSMEG_0216 3-hydroxyacyl-CoA dehydrogenase | MSMEG_6471 Glycine/D-amino acid oxidase |
| MSMEG_0075 Putative alanine and proline rich protein (Uncharacterized protein) | MSMEG_4537 Major membrane protein I (Major membrane protein I (MMP-I)) |
| MSMEG_6077 RNA polymerase-binding transcription factor CarD | MSMEG_6472 Uncharacterized protein |
| MSMEG_6838 Putative esterase | MSMEG_4678 Uncharacterized protein |
| MSMEG_6836 Oxidoreductase FAD-binding domain protein (Putative oxidoreductase) | MSMEG_4538 Cysteine desulfurase (EC 2.8.1.7) |
| MSMEG_3920 Uncharacterized protein | MSMEG_3919 Uncharacterized protein |
| MSMEG_3431 Choline dehydrogenase (EC 1.1.99.1) (Glucose-methanol-choline oxidoreductase) (EC 1.1.99.1) | MSMEG_3922 Uncharacterized protein |
| MSMEG_0978 Aminotransferase class V (Aminotransferase, class V superfamily protein) | MSMEG_0215 Pirin-like protein (YhhW family protein) |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Plogcy5plogcy3slide111norm
Biological.replicate.5.of.6..negative.control
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Biological.replicate.3.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
X2XR.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Sub.MIC.INH
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M..smegmatis.Acid.NO.treated
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..isoniazid.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
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